PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g497570.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Nin-like

Protein Properties

Length: 1146aa MW: 126958 Da PI: 6.3818

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g497570.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	88.2	7e-28	904	954	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+isl +l++yF++++kdAAk++gvc+T+LKriCRq+GI RWP+Rki+++ Pd.00g497570.m01 904 EKTISLPVLRQYFAGSLKDAAKSIGVCPTTLKRICRQHGITRWPSRKIRKV 954 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1146 aa Download sequence
MDYGALMSNS SSYGTLYDTT MEVDFMDEIL FEGCWLQSNA GFNLLRQQQQ LVCPPISQAL 60 TNHPSHYFPP YDHQSNSTVA HLSMSPHQQI YQEENTDGSY PESHSSFVVE GNTEAGRRLW 120 IGPRANPGPS SSVKERLMLA IGYLKECTKG RDVLIQIWVP IKRGGRQYLT THDQPFSLDP 180 NCKSLAGYRN VSKDYQFITE EDSAESVGLP SRAFLGKFLE WTPDVCFLRS YEYPRIDYAQ 240 QYDVRGSLAL PIFENGSGTC LGVVEIVMTP QKVNYRPELE YVCQALEAVD LRSSQNFWPL 300 CVKTRDELFQ AALTEIVEVL ASVCKTHRLP LAQTWAPCIQ QGKGGCRHSD ENYAHCVSTV 360 DAACFVADLD ILGFHEACSE HHLFQGQGIV GTAFTINKMC FATDIKAFSK TEYPLSHHAR 420 MFGLHAAVAI PFRSVYTGPA DLVLEFFLPK DCQDPEEQKQ MLNSLCIVIQ QACRSLHVNV 480 DKELEEEIMF PIREPVIGSD GGLHKEETQR LTSSPTEEPS GKESSWIAHM IEAQQKGKGV 540 SVSLDYQTEE PKEEFKVTTH WGNTQGSLHS GQAVDLRSSQ NFWPLCVKTR DELFQAALTE 600 IVEVLASVCK THRLPLAQTW APCIQQGKGG CRHSDENYAH CVSTVDAACF VADLDILGFH 660 EACSEHHLFQ GQGIVGTAFT INKTCFATDI KAFSKTEYPL SHHARMFGLH AAVAIPFRSV 720 YTGPADLALE FFLPKDCQDP EEQKQMLNSL CIVIQQACRS LHVNVDKELE EEIMFPIREP 780 VIGSDGGLHK EETQRLTSSP TEEPSGKESS WIAHMIEAQQ KGKGVSVSLD YQTEEPKEEF 840 KVTTHWGNTQ GSLHSGQVFS EFGQLHQSSG SHGNVEGGAD SYSFGGRGTS GGRKAGEKRR 900 TKTEKTISLP VLRQYFAGSL KDAAKSIGVC PTTLKRICRQ HGITRWPSRK IRKVGQSLKK 960 LQLVIDSVQG AEGAIHIGSF YSSFPELNSP KFPGSGQYSS MNMSDHSKQV NPQQHDQSGL 1020 YSHVTTTKSP SSSCSQTSGP SVCVAGAQQH TIPINTLGSG DALMTEDPVG MLKRACGDAD 1080 LHASFQEETK LIHRSQSHKS FSDNLSYENL PPLPGSSGRS LRDGGVYRVK ATFMDEKNKV 1140 QHATKL

Sequence ? help Back to Top

Protein Sequence Length: 1146 aa Download sequence

MDYGALMSNS SSYGTLYDTT MEVDFMDEIL FEGCWLQSNA GFNLLRQQQQ LVCPPISQAL  60
TNHPSHYFPP YDHQSNSTVA HLSMSPHQQI YQEENTDGSY PESHSSFVVE GNTEAGRRLW  120
IGPRANPGPS SSVKERLMLA IGYLKECTKG RDVLIQIWVP IKRGGRQYLT THDQPFSLDP  180
NCKSLAGYRN VSKDYQFITE EDSAESVGLP SRAFLGKFLE WTPDVCFLRS YEYPRIDYAQ  240
QYDVRGSLAL PIFENGSGTC LGVVEIVMTP QKVNYRPELE YVCQALEAVD LRSSQNFWPL  300
CVKTRDELFQ AALTEIVEVL ASVCKTHRLP LAQTWAPCIQ QGKGGCRHSD ENYAHCVSTV  360
DAACFVADLD ILGFHEACSE HHLFQGQGIV GTAFTINKMC FATDIKAFSK TEYPLSHHAR  420
MFGLHAAVAI PFRSVYTGPA DLVLEFFLPK DCQDPEEQKQ MLNSLCIVIQ QACRSLHVNV  480
DKELEEEIMF PIREPVIGSD GGLHKEETQR LTSSPTEEPS GKESSWIAHM IEAQQKGKGV  540
SVSLDYQTEE PKEEFKVTTH WGNTQGSLHS GQAVDLRSSQ NFWPLCVKTR DELFQAALTE  600
IVEVLASVCK THRLPLAQTW APCIQQGKGG CRHSDENYAH CVSTVDAACF VADLDILGFH  660
EACSEHHLFQ GQGIVGTAFT INKTCFATDI KAFSKTEYPL SHHARMFGLH AAVAIPFRSV  720
YTGPADLALE FFLPKDCQDP EEQKQMLNSL CIVIQQACRS LHVNVDKELE EEIMFPIREP  780
VIGSDGGLHK EETQRLTSSP TEEPSGKESS WIAHMIEAQQ KGKGVSVSLD YQTEEPKEEF  840
KVTTHWGNTQ GSLHSGQVFS EFGQLHQSSG SHGNVEGGAD SYSFGGRGTS GGRKAGEKRR  900
TKTEKTISLP VLRQYFAGSL KDAAKSIGVC PTTLKRICRQ HGITRWPSRK IRKVGQSLKK  960
LQLVIDSVQG AEGAIHIGSF YSSFPELNSP KFPGSGQYSS MNMSDHSKQV NPQQHDQSGL  1020
YSHVTTTKSP SSSCSQTSGP SVCVAGAQQH TIPINTLGSG DALMTEDPVG MLKRACGDAD  1080
LHASFQEETK LIHRSQSHKS FSDNLSYENL PPLPGSSGRS LRDGGVYRVK ATFMDEKNKV  1140
QHATKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35270.1	0.0	Nin-like family protein