PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g496510.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | FAR1 | ||||||||
Protein Properties | Length: 209aa MW: 24122.4 Da PI: 5.2393 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 85.8 | 6.6e-27 | 42 | 130 | 1 | 89 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 +fY+eYA++vGF +r+++ ++s+ +++i +r++ C+k+g+ + +++ + rr+r++tr gCka++ vk +k+gkw+vt+++++H+H+l Pd.00g496510.m01 42 DFYSEYARHVGFIMRIDQCRRSDVDKRILSRRLSCNKQGRYVKPRDQVRPVRRPRPSTREGCKAMMLVKVNKSGKWVVTRVVKDHTHPL 130 6***************************************999999999**************************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 209 aa Download sequence |
MWVMRSEGGS SGAPETSAER DLNAVAEPYV GMEFDSEDAA KDFYSEYARH VGFIMRIDQC 60 RRSDVDKRIL SRRLSCNKQG RYVKPRDQVR PVRRPRPSTR EGCKAMMLVK VNKSGKWVVT 120 RVVKDHTHPL IVSSGISMDE RDMKIEQLTM ELEREDQLCE LYHGLLLTLL DNVEEQTELI 180 SMKVSGIVND VREFETEVER LPQNELDDN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G12850.1 | 4e-50 | FAR1 family protein |