PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g494500.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 386aa MW: 42467.8 Da PI: 6.2745

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g494500.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	50.9	2.7e-16	255	301	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P + K +Ka++L +A+eY+ksLq Pd.00g494500.m01 255 VHNLSERRRRDRINEKMKALQELIPRC-----NKSDKASMLDEAIEYLKSLQ 301 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
MNRCVPDFEM EDDYSIPTSS APNRLRKSSQ PDDEIMELLW QNGQVVMQSQ NQRPSPNNKK 60 SSQAPSKYDA YPLVDDPFCA DLLYPDSSTV HQTNTAAAAA ELRPNPISAP PIHPPRRTEL 120 QNFLHFSRTN NNKDRVSEAA PSSSKSVVRE STTVVDSCDT PLVGHSSRAL DSGLDGGGGV 180 TAGAATSFVT VATANAATSF PGKEKPRADE DLKRKGRDAE DDGEFQSEDV EFESANGKKK 240 ARGSTSTKRS RAAEVHNLSE RRRRDRINEK MKALQELIPR CNKSDKASML DEAIEYLKSL 300 QLQVQPIPAN DPARVQATNQ SDQMLNALAA QNPNQSRMPN FADPYQQFFN PQQMQLPLQQ 360 NQAMAQPSSK PSSSKGPETQ ENHQSG

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

MNRCVPDFEM EDDYSIPTSS APNRLRKSSQ PDDEIMELLW QNGQVVMQSQ NQRPSPNNKK  60
SSQAPSKYDA YPLVDDPFCA DLLYPDSSTV HQTNTAAAAA ELRPNPISAP PIHPPRRTEL  120
QNFLHFSRTN NNKDRVSEAA PSSSKSVVRE STTVVDSCDT PLVGHSSRAL DSGLDGGGGV  180
TAGAATSFVT VATANAATSF PGKEKPRADE DLKRKGRDAE DDGEFQSEDV EFESANGKKK  240
ARGSTSTKRS RAAEVHNLSE RRRRDRINEK MKALQELIPR CNKSDKASML DEAIEYLKSL  300
QLQVQPIPAN DPARVQATNQ SDQMLNALAA QNPNQSRMPN FADPYQQFFN PQQMQLPLQQ  360
NQAMAQPSSK PSSSKGPETQ ENHQSG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	260	265	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20180.2	6e-54	bHLH family protein