PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g492970.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 237aa MW: 26437 Da PI: 5.9163 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 49.8 | 8.7e-16 | 55 | 106 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr + +++Wv+e+r p + k+ ++lg++ tae+Aa+a++ a+++++g Pd.00g492970.m01 55 PVYRGVRSRD-NNKWVCELRQP---NkKKSGIWLGTYPTAEMAARAHDVAALAFKG 106 68*****888.8******9998...5477***********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MDIIFSQLSD SADQPKSSSS SDASVATLRT SDVILASSRP KKRAGRRVFK ETRHPVYRGV 60 RSRDNNKWVC ELRQPNKKKS GIWLGTYPTA EMAARAHDVA ALAFKGNLAC LNFADSGWRL 120 PVAASMDSMD IQRAAAEAAE GFRPVEFGGV SSDSSDEKER MVVVEEKKKK QVIVDMGKSC 180 SRLNLFYLDE EEMFDMPRLI DNMAEGLLLS PPQCLAGYLN WDDMETEADP KLWSFSI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51990.1 | 7e-59 | ERF family protein |