PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g492870.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 197aa MW: 21368.7 Da PI: 4.2212 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 49.2 | 1.3e-15 | 10 | 59 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++y+G+r ++ g+Wv+eIr+p++ ++r++lg++ t+e+Aa a++ a+++l+g Pd.00g492870.m01 10 TRYHGIR-CR-GGKWVSEIREPRK---TRRIWLGTYPTPEMAASAYDVAALALKG 59 589***9.55.7*********843...5***********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 197 aa Download sequence |
MASSSCGKQT RYHGIRCRGG KWVSEIREPR KTRRIWLGTY PTPEMAASAY DVAALALKGG 60 DAVLNFPSSI ASYPSNEEAN NSLELKESPK KQEDDVTTMM NSTSLASSVG MDEEELFGMP 120 NLLAEMAEGM LLSPPRPPDY PESGNSDGGE SDGCDQTNGV CLYRETEDAS LSIVVSLAIN 180 PREGEIDVVN RDLPDKE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52020.1 | 3e-34 | ERF family protein |