PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g492860.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 184aa MW: 19646.8 Da PI: 4.4182 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.3 | 7e-17 | 11 | 59 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+G+r ++ g+Wv+eIr+p++ +kr++lg+f tae+Aa+a++ a+++l+g Pd.00g492860.m01 11 TYRGIR-CR-GGKWVSEIREPRK---TKRIWLGTFPTAEMAAAAYDVAALALKG 59 69***9.55.7*********843...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 184 aa Download sequence |
MASTSSGKHP TYRGIRCRGG KWVSEIREPR KTKRIWLGTF PTAEMAAAAY DVAALALKGA 60 DVALNFPGFI GSYPVPASTS AQDICSAAAA AAATLRKNDD SRESPGQRQK DDKDDVTVSN 120 SISLASSSVG DFMDEEELFG MPNLLMDMAE GMLVSPPRMN DSPPSDYDDS PGNSDGGESL 180 LWNY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52020.1 | 2e-34 | ERF family protein |