PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g492640.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | HSF | ||||||||
Protein Properties | Length: 299aa MW: 32494.1 Da PI: 4.8139 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 116.3 | 1.8e-36 | 32 | 123 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 Fl+k+y++++d+++++liswse+g++f+v+ + efa+++LpkyFkh+nf+SFvRQLn+YgF+kv ++ weF+++ Fk+g+k ll Pd.00g492640.m01 32 FLTKTYQLVDDPSVDDLISWSEDGSAFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDR---------WEFANDCFKRGEKGLL 115 9*****************************************************************99.........**************** PP XXXXXXXX CS HSF_DNA-bind 95 ekikrkks 102 ++i+r+k Pd.00g492640.m01 116 REIQRRKI 123 *****985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 299 aa Download sequence |
MASLQADQNG DSGPANGAGG GGDSQRTLPT PFLTKTYQLV DDPSVDDLIS WSEDGSAFIV 60 WRPAEFARDL LPKYFKHNNF SSFVRQLNTY GFRKVVPDRW EFANDCFKRG EKGLLREIQR 120 RKISPSVSAS PAAITGTLAT VAPGVSPANS GDEQVISSNS SPVAPPATML SRIRSCTTTS 180 DVLEENERLR KENMQLSHEL TQLRGLCNNI LALMTNYASG QLEGGGGGGG SVMDEGKPLE 240 LSPVKEAEPL FGVSIGVKRV RRDEEEEEQH REGSEAMKSE PSDGSSKRDQ DSTWLELGK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G11660.1 | 3e-86 | HSF family protein |