PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g491700.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 288aa MW: 31552.1 Da PI: 7.5517 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.9 | 7.1e-20 | 108 | 157 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 y+G+r+++ +g+W+AeIrdp + r++lg++ taeeAa+a++ a+++++g Pd.00g491700.m01 108 VYRGIRQRP-WGKWAAEIRDPH----KgVRVWLGTYNTAEEAARAYDDAARRIRG 157 69*******.**********72....35*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 288 aa Download sequence |
MCGGAIISDF ISAKRGRTLT AEDLWTEFDT ISDLLGLDHS SSSNNNNKNK DQFEHQQNNK 60 RVAQKPKIPL SKGAGTSEKP KKASPDAGAQ KEEVGKASDK NKRVRKNVYR GIRQRPWGKW 120 AAEIRDPHKG VRVWLGTYNT AEEAARAYDD AARRIRGGKA KLNFPELPPS SVPAPATPPL 180 KKRCVVGPAE STQSSLESSG NYCNYDPFEG GEIYGKKEVG SEHELKEQIS SLELFLGLDE 240 EGPSEVNGRG GGESNNSLDL WMLGDLAADA FVYHFDFTDS KTNLLVGL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G16770.1 | 2e-44 | ERF family protein |