PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g490620.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 1165aa MW: 130225 Da PI: 9.1012

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g490620.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29.2	2.2e-09	46	81	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 WT+eE e +++a +++G++ Wk++a+ + +R+ +++ Pd.00g490620.m02 46 QWTKEELENFYEAYRKYGKD-WKKVASVVR-HRSVEMV 81 6***************99.******9.9998766 PP

Sequence ? help Back to Top
Protein Sequence Length: 1165 aa Download sequence
MAPSRKSRSV NKRFSYMNEA ASNKYGENAN KTGQKKRKLS DMLGPQWTKE ELENFYEAYR 60 KYGKDWKKVA SVVRHRSVEM VEALYSMNKA YLSLPEGVAS VVGLIAMMTD HYCILGGSDS 120 EQENNEDAET SRKPQKHARS KLRSESSKGL EGHIPDFSES HPMASTSDCL SLLKNRRSGI 180 RPHAVKKRTP RVPVAYSNDQ DNSRKYSSPA RQGLKLNADA NNNDVAHEIA LALTEASHRG 240 GSPLVSWTPK RKAKGTTPSP VRNGERMCAE SEITNARLHG CEMDEGGCEL SLGSTEADND 300 YYDRNEKYAM GREGTGTLEV QQRRKRYFVK KKEVDESKNK HVEDIKEACS GTEEGQKLVA 360 IKGKLDTKVV KSARSFYKDT RKKSKKALIG GDEGSPFDAL QTLADLSLMM PEAADTESSA 420 HVKEDNFNIA NKSKLKGSRP IPGVEHAAFK TSKLGKLGEG VHQSNSGLQK GKQKSLSFKI 480 YNEAQTDCYA SDNEKIEATV EVKKSASKGK RSSHYTTHPK QGKLVKKTLW NASSTTDRKR 540 EENDSGLSSV QVPSANPANL PTKNKGKWED MQKSSIQKDT KSPESILDDQ PDRLVPSFRN 600 RELNIKEKLS SCLSRYQVRR WCAFEWFYSA IDYPWFAKRE FVEYLDHVGL GHVPRLTRVE 660 WGVIRSSLGR PRRFSEQFLK EEKEKLNQYR ESVRMHYAEL NAGTREGLPT DLARPLSVGQ 720 HVIAFHPRAR EIHNGIVLTV DHSRCSVQFD QPELGVEYIM DVDCMPLHPA ENLPASFRKH 780 NVTVNKYIEN LKELKINEQL KEGTTKGYMK ISSSDKLVST GVPGYILPSN HRINKSSKQT 840 GVKSSSFNVQ AKVGHGETAS TQVANYQPSI PAQTQAKEAD VQAINELTRA LDKKEAVVSE 900 LRRMNDEVFE NQRDEDNSIR DSEPFKKEYA AVLLQLSQVN DQVSSALLCL RQRNTYRGSF 960 PHTVVKPMDN LSDPGSHSNS YGYSCDVQES ASHMREIVES SRAKAHKMVD AAMQAFSSLR 1020 KENNFDKIEE VIDFVSNRLS DDAGMLAMGS STTPADPIPF SQDQLTSCTS KPLATGCAHD 1080 PPKSNNLSNQ SEEKLLSDLI VNCVAAFMMI QTCTARQFPP ADVAQVLDHA VTSLQPFCPQ 1140 NLSVYGEIQK CMGIIRNQIM ALVPT

Sequence ? help Back to Top

Protein Sequence Length: 1165 aa Download sequence

MAPSRKSRSV NKRFSYMNEA ASNKYGENAN KTGQKKRKLS DMLGPQWTKE ELENFYEAYR  60
KYGKDWKKVA SVVRHRSVEM VEALYSMNKA YLSLPEGVAS VVGLIAMMTD HYCILGGSDS  120
EQENNEDAET SRKPQKHARS KLRSESSKGL EGHIPDFSES HPMASTSDCL SLLKNRRSGI  180
RPHAVKKRTP RVPVAYSNDQ DNSRKYSSPA RQGLKLNADA NNNDVAHEIA LALTEASHRG  240
GSPLVSWTPK RKAKGTTPSP VRNGERMCAE SEITNARLHG CEMDEGGCEL SLGSTEADND  300
YYDRNEKYAM GREGTGTLEV QQRRKRYFVK KKEVDESKNK HVEDIKEACS GTEEGQKLVA  360
IKGKLDTKVV KSARSFYKDT RKKSKKALIG GDEGSPFDAL QTLADLSLMM PEAADTESSA  420
HVKEDNFNIA NKSKLKGSRP IPGVEHAAFK TSKLGKLGEG VHQSNSGLQK GKQKSLSFKI  480
YNEAQTDCYA SDNEKIEATV EVKKSASKGK RSSHYTTHPK QGKLVKKTLW NASSTTDRKR  540
EENDSGLSSV QVPSANPANL PTKNKGKWED MQKSSIQKDT KSPESILDDQ PDRLVPSFRN  600
RELNIKEKLS SCLSRYQVRR WCAFEWFYSA IDYPWFAKRE FVEYLDHVGL GHVPRLTRVE  660
WGVIRSSLGR PRRFSEQFLK EEKEKLNQYR ESVRMHYAEL NAGTREGLPT DLARPLSVGQ  720
HVIAFHPRAR EIHNGIVLTV DHSRCSVQFD QPELGVEYIM DVDCMPLHPA ENLPASFRKH  780
NVTVNKYIEN LKELKINEQL KEGTTKGYMK ISSSDKLVST GVPGYILPSN HRINKSSKQT  840
GVKSSSFNVQ AKVGHGETAS TQVANYQPSI PAQTQAKEAD VQAINELTRA LDKKEAVVSE  900
LRRMNDEVFE NQRDEDNSIR DSEPFKKEYA AVLLQLSQVN DQVSSALLCL RQRNTYRGSF  960
PHTVVKPMDN LSDPGSHSNS YGYSCDVQES ASHMREIVES SRAKAHKMVD AAMQAFSSLR  1020
KENNFDKIEE VIDFVSNRLS DDAGMLAMGS STTPADPIPF SQDQLTSCTS KPLATGCAHD  1080
PPKSNNLSNQ SEEKLLSDLI VNCVAAFMMI QTCTARQFPP ADVAQVLDHA VTSLQPFCPQ  1140
NLSVYGEIQK CMGIIRNQIM ALVPT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein