PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g490620.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 1141aa MW: 127702 Da PI: 8.9383

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g490620.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29.2	2.1e-09	46	81	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 WT+eE e +++a +++G++ Wk++a+ + +R+ +++ Pd.00g490620.m01 46 QWTKEELENFYEAYRKYGKD-WKKVASVVR-HRSVEMV 81 6***************99.******9.9998766 PP

Sequence ? help Back to Top
Protein Sequence Length: 1141 aa Download sequence
MAPSRKSRSV NKRFSYMNEA ASNKYGENAN KTGQKKRKLS DMLGPQWTKE ELENFYEAYR 60 KYGKDWKKVA SVVRHRSVEM VEALYSMNKA YLSLPEGVAS VVGLIAMMTD HYCILGGSDS 120 EQENNEDAET SRKPQKHARS KLRSESSKGL EGHIPDFSES HPMASTSDCL SLLKNRRSGI 180 RPHAVKKRTP RVPVAYSNDQ DNSRKYSSPA RQGLKLNADA NNNDVAHEIA LALTEASHRG 240 GSPLVSWTPK RKAKGTTPSP VRNGERMCAE SEITNARLHG CEMDEGGCEL SLGSTEADND 300 YYDRNEKYAM GREGTGTLEV QQRRKRYFVK KKEVDESKNK HVEDIKEACS GTEEGQKLVA 360 IKGKLDTKVV KSARSFYKDT RKKSKKALIG GDEGSPFDAL QTLADLSLMM PEAADTESSA 420 HVKEDNFNIA NKSKLKGSRP IPGVEHAAFK TSKLGKLGEG VHQSNSGLQK GKQKSLSFKI 480 YNEAQTDCYA SDNEKIEATV EVKKSASKGK RSSHYTTHPK QGKLVKKTLW NASSTTDRKR 540 EENDSGLSSV QVPSANPANL PTKNKGKWED MQKSSIQKDT KSPESILDDQ PDRLVPSFRN 600 RELNIKEKLS SCLSRYQVRR WCAFEWFYSA IDYPWFAKRE FVEYLDHVGL GHVPRLTRVE 660 WGVIRSSLGR PRRFSEQFLK EEKEKLNQYR ESVRMHYAEL NAGTREGLPT DLARPLSVGQ 720 HVIAFHPRAR EIHNGIVLTV DHSRCSVQFD QPELGVEYIM DVDCMPLHPA ENLPASFRKH 780 NVTVNKYIEN LKELKINEQL KEGTTKGYMK ISSSDKLVKS SSFNVQAKVG HGETASTQVA 840 NYQPSIPAQT QAKEADVQAI NELTRALDKK EAVVSELRRM NDEVFENQRD EDNSIRDSEP 900 FKKEYAAVLL QLSQVNDQVS SALLCLRQRN TYRGSFPHTV VKPMDNLSDP GSHSNSYGYS 960 CDVQESASHM REIVESSRAK AHKMVDAAMQ AFSSLRKENN FDKIEEVIDF VSNRLSDDAG 1020 MLAMGSSTTP ADPIPFSQDQ LTSCTSKPLA TGCAHDPPKS NNLSNQSEEK LLSDLIVNCV 1080 AAFMMIQTCT ARQFPPADVA QVLDHAVTSL QPFCPQNLSV YGEIQKCMGI IRNQIMALVP 1140 T

Sequence ? help Back to Top

Protein Sequence Length: 1141 aa Download sequence

MAPSRKSRSV NKRFSYMNEA ASNKYGENAN KTGQKKRKLS DMLGPQWTKE ELENFYEAYR  60
KYGKDWKKVA SVVRHRSVEM VEALYSMNKA YLSLPEGVAS VVGLIAMMTD HYCILGGSDS  120
EQENNEDAET SRKPQKHARS KLRSESSKGL EGHIPDFSES HPMASTSDCL SLLKNRRSGI  180
RPHAVKKRTP RVPVAYSNDQ DNSRKYSSPA RQGLKLNADA NNNDVAHEIA LALTEASHRG  240
GSPLVSWTPK RKAKGTTPSP VRNGERMCAE SEITNARLHG CEMDEGGCEL SLGSTEADND  300
YYDRNEKYAM GREGTGTLEV QQRRKRYFVK KKEVDESKNK HVEDIKEACS GTEEGQKLVA  360
IKGKLDTKVV KSARSFYKDT RKKSKKALIG GDEGSPFDAL QTLADLSLMM PEAADTESSA  420
HVKEDNFNIA NKSKLKGSRP IPGVEHAAFK TSKLGKLGEG VHQSNSGLQK GKQKSLSFKI  480
YNEAQTDCYA SDNEKIEATV EVKKSASKGK RSSHYTTHPK QGKLVKKTLW NASSTTDRKR  540
EENDSGLSSV QVPSANPANL PTKNKGKWED MQKSSIQKDT KSPESILDDQ PDRLVPSFRN  600
RELNIKEKLS SCLSRYQVRR WCAFEWFYSA IDYPWFAKRE FVEYLDHVGL GHVPRLTRVE  660
WGVIRSSLGR PRRFSEQFLK EEKEKLNQYR ESVRMHYAEL NAGTREGLPT DLARPLSVGQ  720
HVIAFHPRAR EIHNGIVLTV DHSRCSVQFD QPELGVEYIM DVDCMPLHPA ENLPASFRKH  780
NVTVNKYIEN LKELKINEQL KEGTTKGYMK ISSSDKLVKS SSFNVQAKVG HGETASTQVA  840
NYQPSIPAQT QAKEADVQAI NELTRALDKK EAVVSELRRM NDEVFENQRD EDNSIRDSEP  900
FKKEYAAVLL QLSQVNDQVS SALLCLRQRN TYRGSFPHTV VKPMDNLSDP GSHSNSYGYS  960
CDVQESASHM REIVESSRAK AHKMVDAAMQ AFSSLRKENN FDKIEEVIDF VSNRLSDDAG  1020
MLAMGSSTTP ADPIPFSQDQ LTSCTSKPLA TGCAHDPPKS NNLSNQSEEK LLSDLIVNCV  1080
AAFMMIQTCT ARQFPPADVA QVLDHAVTSL QPFCPQNLSV YGEIQKCMGI IRNQIMALVP  1140
T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein