PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g490590.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 364aa MW: 39975.8 Da PI: 5.9417 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.1 | 9.2e-18 | 51 | 99 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + GVr+++ +gr++AeIrdps+ + r++lg+f+ta+eAa a+++a+++++g Pd.00g490590.m01 51 FLGVRRRP-WGRYAAEIRDPST---KERHWLGTFDTAQEAALAYDRAALSMKG 99 56******.**********965...5************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 364 aa Download sequence |
MSTSKTSDKP FKACEQGQAQ MGFASVLQRN TPPSQSGERR GRRKQAEPGR FLGVRRRPWG 60 RYAAEIRDPS TKERHWLGTF DTAQEAALAY DRAALSMKGS QARTNFIYSD NTTFHSLLTP 120 FDLQTLLPQQ SQFFSAAKQQ PTNHNSPPRQ SGIFQNDQTQ NPNIRSNNIN TCGAETSHGS 180 SAHDGDDDGF FFSNGSNSNS GYLACIVPDN CLRPPSESDH HATNHRSSKT CDFNIDQDCS 240 FANTNSIETK SHCLDVMNVQ PALMSSNTNP PGDQLPSFDG FSHGFWDNQQ PIWELHSREL 300 SAAMVDNPFM IEDGCMGGGA LYPIVENSSF GLIPQATTSS SSFSCSPSVP PFGDAVFEFG 360 QSLF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G18560.1 | 2e-51 | ERF family protein |