PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g489410.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 162aa    MW: 17682.9 Da    PI: 10.0967
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g489410.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.58.2e-1968118256
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                       +++ Vr ++ +gr++AeIrdp++   rkr++lg+++taeeAa+ +++a++kl+g+
  Pd.00g489410.m01  68 KISRVRKRP-WGRYAAEIRDPTQ---RKRVWLGTYDTAEEAAAVYDRAALKLRGP 118
                       6778*****.**********965...5**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    
MVRTRESILA KDVHKRGRGR STQTSVLLLD RTRESILAKD VHKRDADATD SSSDEDSVVP  60
GVKRHVRKIS RVRKRPWGRY AAEIRDPTQR KRVWLGTYDT AEEAAAVYDR AALKLRGPHA  120
VTNFTIPVIA EETVADEVVP AAGSSHVSEV GGEGGAAGCV SI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53290.13e-23ERF family protein