PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g489400.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GATA
Protein Properties Length: 287aa    MW: 31412 Da    PI: 6.642
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g489400.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA48.51.2e-15220256135
              GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       C++Cg  +  Tp++Rrgpdg++tLCnaCGl+++ kg+
  Pd.00g489400.m01 220 CRHCGINEkcTPMMRRGPDGPRTLCNACGLMWANKGT 256
                       **********************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MDDICGSDEP MHMNDNLHLQ YMQEHEHHHG LDHISNVNGV ADDHDNGSGG AELVQADVPS  60
DPMNLSDTRD GMMNHGPENG DQLTLSFQGQ VFVFDCVSPE KVQAVLLLLG GSEVPPSMPA  120
VPVTTQHTNR GLTSTPQRLS VPQRLASLIR FREKRKERNF DKKIRYTVRK EVALRMQRKK  180
GQFTSSKPNN DDSASAVTSS GSNGSWSQDG NGSQHQEAVC RHCGINEKCT PMMRRGPDGP  240
RTLCNACGLM WANKGTLRDL SKASEAAAPQ AGQNPSVSKS EDMKPDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.21e-121GATA family protein