PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g487940.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 575aa MW: 62599.2 Da PI: 8.7431

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g487940.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	26.7	9.7e-09	386	433	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq Pd.00g487940.m01 386 SHSLAERVRREKISERMKFLQDLVPGC----NKVTGKAVMLDEIINYVQSLQ 433 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 575 aa Download sequence
MGKDRTATPS WNPSGFGMEM QSNELNCGSQ QLPNSLFNAN WDNSMDQSDP FESALSSIVS 60 SPAATNAAIA AGKGGSNGEM IRELIGRLGS ICNSGEISSH SYICGNNSTN TSCYSTPLNS 120 SPKPNLSMID PQMRGNLPIP GNHLPSHPSL APFQADPGFV ERAARFSCFG GGNFGALNGQ 180 VNLNEAELAY RSMPKIDSGK LSRASSNQSL KVAAGSQLGV QESNKSSPQG ENSAPDKKFG 240 RFSRSSTPEN AELGDSREGS SVSEQIPEEK PKKPLHLPLL KMARLWQKKR NQIPREAKQM 300 KLLGMKRQLQ RQXXXXEKEE PNSKRSKTDE ASGNEKAAAK AKTEPSGGSK ATGDGAQKQT 360 KDNSEPPEAP KDYIHVRARR GQATDSHSLA ERVRREKISE RMKFLQDLVP GCNKVTGKAV 420 MLDEIINYVQ SLQRQVEFLS MKLSTVNPRM DLNMEALLSK EILQSRGSLQ NALYQLDSAI 480 PSFPFGYQPQ QLPPLHSSSI SSGTETQFPE SPLNAAMRQS QGMQLPTFDR FGGAAPQAPQ 540 FYEDDLQSVV QMGFGQIQQE SLHGSMISAQ MKVEL

Sequence ? help Back to Top

Protein Sequence Length: 575 aa Download sequence

MGKDRTATPS WNPSGFGMEM QSNELNCGSQ QLPNSLFNAN WDNSMDQSDP FESALSSIVS  60
SPAATNAAIA AGKGGSNGEM IRELIGRLGS ICNSGEISSH SYICGNNSTN TSCYSTPLNS  120
SPKPNLSMID PQMRGNLPIP GNHLPSHPSL APFQADPGFV ERAARFSCFG GGNFGALNGQ  180
VNLNEAELAY RSMPKIDSGK LSRASSNQSL KVAAGSQLGV QESNKSSPQG ENSAPDKKFG  240
RFSRSSTPEN AELGDSREGS SVSEQIPEEK PKKPLHLPLL KMARLWQKKR NQIPREAKQM  300
KLLGMKRQLQ RQXXXXEKEE PNSKRSKTDE ASGNEKAAAK AKTEPSGGSK ATGDGAQKQT  360
KDNSEPPEAP KDYIHVRARR GQATDSHSLA ERVRREKISE RMKFLQDLVP GCNKVTGKAV  420
MLDEIINYVQ SLQRQVEFLS MKLSTVNPRM DLNMEALLSK EILQSRGSLQ NALYQLDSAI  480
PSFPFGYQPQ QLPPLHSSSI SSGTETQFPE SPLNAAMRQS QGMQLPTFDR FGGAAPQAPQ  540
FYEDDLQSVV QMGFGQIQQE SLHGSMISAQ MKVEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G23690.1	1e-67	bHLH family protein