PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g485670.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 884aa MW: 97260.7 Da PI: 7.4092

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g485670.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	55.8	8.2e-18	371	470	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f+k l+ sd+++ grlvlpk +ae++ ++++e+ l+++d +g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ e Pd.00g485670.m01 371 FEKMLSASDAGRIGRLVLPKACAEAYfpPISQPEGLPLRIQDVKGKEWVFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRMD-PE 461 89************************555567778***********99899999999.*******************876.77 PP E..EEEEE- CS B3 90 felvvkvfr 98 ++l +++++ Pd.00g485670.m01 462 GKLIMGFRK 470 777777766 PP

Sequence ? help Back to Top
Protein Sequence Length: 884 aa Download sequence
MSSVSQFCGL HPSVFSQSVR CPFSFTPRSG SGFGVSCELE NLSAKMEPRT CMNAACGTSS 60 SIEWKKGWAL RSGGFANLCL KCWSAYEQSI FCDIFHSKES GWRECILCGK RLHCGCIASM 120 FLLDLLDGGG GKCIKCAKSS EPQPILSDEK PDGLGISKIS ELQPTAQDNQ LDGTNVEKLK 180 LIQLGNNKDC NGFRNLLQLQ NNDANGLLQK MKHADTPPPV GEIGGTCLSN FNLASNGSSE 240 APKAEVFKAN LGINDIYDSL PQTNLSMSLG APLGKANPVP AAMFDEREHS KTSSPLLPGA 300 RSRNLFPKPP KLVLGAGLEE NSTIASHARV ARPPAEGRGR NQLLPRYWPR ITDQELQQIS 360 GDSNSTIVPL FEKMLSASDA GRIGRLVLPK ACAEAYFPPI SQPEGLPLRI QDVKGKEWVF 420 QFRFWPNNNS RMYVLEGVTP CIQSMQLQAG DTVTFSRMDP EGKLIMGFRK ASNSVAMQSL 480 KGSMDPHLNA LSKHLTTASG DISWHKSEKQ EGRTREGMLL PSLLVPERKR TRNIGSKSKR 540 LLIDSQDALE LKLTWEEAQD LLRPPPAAKP STIMIEDLEF EEYEEPPVFG KRSIFIVRLT 600 GEHEQWAQCD SCSKWRRLPV DVLLPSKWTC ADNAWDQSRR SCSAPDELAP RELESFLRMS 660 KEFKKRRTVA DNRPTQEHES SGLDALANAA ILGDNAADPG TASVATTTKH PRHRPGCSCI 720 VCIQPPSGKG KHKPNCTCNV CNTVKRRFKT LMINKKKRQS EREAEIAYRN QHAWGPRDEA 780 EVDSTSRHVS SHVDPSDNEA RSANESDSKS QSKVAETGKG ILDLNCHPGR EGELQAGPNH 840 ATSSTSHVPP QATNESEDQH NENQCQEQES GGEERPDQGQ DDPL

Sequence ? help Back to Top

Protein Sequence Length: 884 aa Download sequence

MSSVSQFCGL HPSVFSQSVR CPFSFTPRSG SGFGVSCELE NLSAKMEPRT CMNAACGTSS  60
SIEWKKGWAL RSGGFANLCL KCWSAYEQSI FCDIFHSKES GWRECILCGK RLHCGCIASM  120
FLLDLLDGGG GKCIKCAKSS EPQPILSDEK PDGLGISKIS ELQPTAQDNQ LDGTNVEKLK  180
LIQLGNNKDC NGFRNLLQLQ NNDANGLLQK MKHADTPPPV GEIGGTCLSN FNLASNGSSE  240
APKAEVFKAN LGINDIYDSL PQTNLSMSLG APLGKANPVP AAMFDEREHS KTSSPLLPGA  300
RSRNLFPKPP KLVLGAGLEE NSTIASHARV ARPPAEGRGR NQLLPRYWPR ITDQELQQIS  360
GDSNSTIVPL FEKMLSASDA GRIGRLVLPK ACAEAYFPPI SQPEGLPLRI QDVKGKEWVF  420
QFRFWPNNNS RMYVLEGVTP CIQSMQLQAG DTVTFSRMDP EGKLIMGFRK ASNSVAMQSL  480
KGSMDPHLNA LSKHLTTASG DISWHKSEKQ EGRTREGMLL PSLLVPERKR TRNIGSKSKR  540
LLIDSQDALE LKLTWEEAQD LLRPPPAAKP STIMIEDLEF EEYEEPPVFG KRSIFIVRLT  600
GEHEQWAQCD SCSKWRRLPV DVLLPSKWTC ADNAWDQSRR SCSAPDELAP RELESFLRMS  660
KEFKKRRTVA DNRPTQEHES SGLDALANAA ILGDNAADPG TASVATTTKH PRHRPGCSCI  720
VCIQPPSGKG KHKPNCTCNV CNTVKRRFKT LMINKKKRQS EREAEIAYRN QHAWGPRDEA  780
EVDSTSRHVS SHVDPSDNEA RSANESDSKS QSKVAETGKG ILDLNCHPGR EGELQAGPNH  840
ATSSTSHVPP QATNESEDQH NENQCQEQES GGEERPDQGQ DDPL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	0.0	B3 family protein