PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g485530.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 308aa MW: 34590.1 Da PI: 5.5071 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 36 | 1.4e-11 | 160 | 194 | 2 | 34 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST..T--- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa..gCpv 34 +Dg++WrKYGqK + ++++pr Y + + +C++ Pd.00g485530.m01 160 EDGHAWRKYGQKLILNAKHPRDYLKASELvlDCTS 194 7************************9987778876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 308 aa Download sequence |
MEGVSSNRQS EMEELIQGRE VASGQLSRVI NLHNNRSLTV NGDHNHDLGS GDDEGFVNKM 60 LGSFSNTLFI ANGKEMKEFH HHDDQELISD QIIQVNTSGG GGAGASSWDV DHLLDHAIKC 120 EASHEETCKS ASTSSTDRRG SYKKRKTCHS WIKDSPALTE DGHAWRKYGQ KLILNAKHPR 180 DYLKASELVL DCTSPRESSK FIRFDDTNLS SKQEHPFFSS FKSLKGEEYF KEETMPSDYM 240 TTQHHNQLAL SDYLVSPPDL PAFASPGLMS GFASANIAQL DEDAIYRKMA GFNYDDFAFD 300 EFLQHELR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56400.1 | 3e-09 | WRKY family protein |