PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g485500.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 292aa MW: 33150.5 Da PI: 4.6742 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 32.3 | 2e-10 | 146 | 179 | 2 | 33 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST..T-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa..gCp 33 dDg+ WrKYGqK + +s+++r Y + +C+ Pd.00g485500.m01 146 DDGHGWRKYGQKRILNSKHSRDYLNASELllDCT 179 8**********************98887666776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 292 aa Download sequence |
MTSHDNNVNR RARVEALRHM LYDVEAHLAV GGNRVLNLGG LIMEWSWPES VLSNGERVKE 60 ELMQGRELAE SDGEIVSSDQ IQGISSGGGS ADSSSWDANH TAAVIKSEDF YEESCKSTST 120 FKDRRGSYKR RKTSHSWTRD TPALTDDGHG WRKYGQKRIL NSKHSRDYLN ASELLLDCTS 180 PRESSNFIRF GDSKQDHPFF SFFTSVKREE LVFKEESIIN EEIPPTSDDR VITSHDNPSW 240 LCDYLVSPDL TMFESSEPPS GFSSTLDEFD HEDVISRLMM GSFDLDEVLQ YI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56400.1 | 2e-08 | WRKY family protein |