PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g483130.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 293aa    MW: 32636.1 Da    PI: 4.8626
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g483130.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY79.63.5e-25114166258
                       --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 
                       dDgy+WrKYGqK++k+s++pr    Ct ++C++kk+vers+edp++++itYeg H h
  Pd.00g483130.m01 114 DDGYKWRKYGQKSIKNSPNPR----CTNPRCSAKKQVERSSEDPDTLIITYEGLHLH 166
                       8*******************6....******************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MEYAMGATWS DGSEEELVRE LLDNETPFFV LPEEALQSQM SVSNEDSVVN RFIPTVYSGP  60
TIKDIETALS VTTGAIQPQE LSPARLSMLE RGLSKVEHKY TLKIKSCDNG AMADDGYKWR  120
KYGQKSIKNS PNPRCTNPRC SAKKQVERSS EDPDTLIITY EGLHLHFAYP FFPLNNQAQN  180
TSPPMKKPRN KTSQPHAEDR EHEAQESPRS ITPDPDPDLQ PGAFPDPHEE FVEKEPSAQG  240
LLQDVVPFMI RNPNPSSASS NSSCSSYRSS PTSPSSLSWA TSYFDVGFNH SFG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43290.13e-51WRKY family protein