PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g482800.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 568aa MW: 62728.3 Da PI: 4.8937

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g482800.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	62	1.2e-19	110	163	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r +W + L e+F+ a++++ G ++AtPk+ile+m+ ++Lt+++v+SH QkYR+ Pd.00g482800.m01 110 KKRCEWKKSLREKFMLAITHI-GLDNATPKRILEFMNEPDLTIKNVASHFQKYRI 163 689****************.******************************6 PP
2	Myb_DNA-binding	23.2	1.6e-07	112	162	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W + + e++ a++ G + t+k+I + m+ +t k++ s++qky+ Pd.00g482800.m01 112 RCEWKKSLREKFMLAITHIGLDnaTPKRILEFMNePDLTIKNVASHFQKYR 162 568***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 568 aa Download sequence
MASKSALVFA VLFSVLVLCL QGAYADRIQG WEGGHGGGDD SGAIGGGFGN GNWDSQGYGF 60 SSRSCYELKC DSCPKWCLTG DEEKQEKRAK RGRTRSREGD DEERTVSPGK KRCEWKKSLR 120 EKFMLAITHI GLDNATPKRI LEFMNEPDLT IKNVASHFQK YRIFLKQLMK VAVAGDEDMR 180 ERLRRSSFAL GHPELFFNNN ERDQHHSQLL KQQQMGTSIG STFQPSAGIG STLPLTAAAS 240 NNYGSIQFPN DQQSSTSSSS RYIPQLIGSG QSSLLNNNPA NFLRQQPMLG NRNGDQLFCQ 300 ENRPAAFGMQ QPSNNFENGG VSFDPMNNLG LPTIILGLTN NNIGTNNLMQ VYPLQGQPRT 360 NNPVSYNLAT SVNQNGFETG ASSAYQFPPN LPNNNGDPDQ QKTVPVLLPP EGNFNDQCDL 420 PNINVGGGNF ENSNRGFMNN TNTVVAPPTL INNNNISHEQ ESVSDSDISM MRHYLFTYEQ 480 DNYQPPFQQQ DGGHDQLPYQ VEVPDPAANQ VPNLSADKVP NPGPYHVEDN APNETILEPG 540 MPSLSELEDD NTWQSKTEQG TIRIQSFE

Sequence ? help Back to Top

Protein Sequence Length: 568 aa Download sequence

MASKSALVFA VLFSVLVLCL QGAYADRIQG WEGGHGGGDD SGAIGGGFGN GNWDSQGYGF  60
SSRSCYELKC DSCPKWCLTG DEEKQEKRAK RGRTRSREGD DEERTVSPGK KRCEWKKSLR  120
EKFMLAITHI GLDNATPKRI LEFMNEPDLT IKNVASHFQK YRIFLKQLMK VAVAGDEDMR  180
ERLRRSSFAL GHPELFFNNN ERDQHHSQLL KQQQMGTSIG STFQPSAGIG STLPLTAAAS  240
NNYGSIQFPN DQQSSTSSSS RYIPQLIGSG QSSLLNNNPA NFLRQQPMLG NRNGDQLFCQ  300
ENRPAAFGMQ QPSNNFENGG VSFDPMNNLG LPTIILGLTN NNIGTNNLMQ VYPLQGQPRT  360
NNPVSYNLAT SVNQNGFETG ASSAYQFPPN LPNNNGDPDQ QKTVPVLLPP EGNFNDQCDL  420
PNINVGGGNF ENSNRGFMNN TNTVVAPPTL INNNNISHEQ ESVSDSDISM MRHYLFTYEQ  480
DNYQPPFQQQ DGGHDQLPYQ VEVPDPAANQ VPNLSADKVP NPGPYHVEDN APNETILEPG  540
MPSLSELEDD NTWQSKTEQG TIRIQSFE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G07210.1	3e-18	ARR-B family protein