PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g481770.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 475aa MW: 51764.2 Da PI: 8.7138 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 104.4 | 6.1e-33 | 195 | 251 | 3 | 60 |
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 DgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkvers d+++ ei+Y+geHnh+k Pd.00g481770.m01 195 DGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSL-DGQIAEIVYKGEHNHSK 251 9***************************************.***************85 PP | |||||||
2 | WRKY | 103.6 | 1.1e-32 | 395 | 451 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+vkg+++prsYYrCts +C+v+k+ver ++dpk++++tYeg+Hnh+ Pd.00g481770.m01 395 DGFRWRKYGQKVVKGNPYPRSYYRCTSLKCSVRKHVERVSDDPKAFITTYEGKHNHD 451 9*******************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 475 aa Download sequence |
MDIKEAERVV IAKPVASRPT CSSFRSFTEL LAGAIDASPS NISSETAVPA IRPKTVRFKP 60 TVNHAVSGLV SSQAEMSGTA HSNSSEKISK SDGRASVVYK PLAKVVSRAT VSVLANMGNF 120 NTSHQSTQSS VEAGVLHQNQ DKCFRSQLSP NLRHNDPSCA ETNQTIEPLK IASQNVEEDP 180 KHIPSTANTD RPSYDGYNWR KYGQKQVKGS EYPRSYYKCT HPNCPVKKKV ERSLDGQIAE 240 IVYKGEHNHS KPQPPKKSSS GTQGLGLASD GTGQDTNNRL WNSQLNERNE GSEGRVEDQN 300 EVGLPVHSYQ SKAPLLYDPL ASGGINAGGG TPDNSCGLSG ECEEGSKGPE AEDYEPRSKR 360 RKSENQSNEG GISGEGVPDP RVVVQSSVDS DMTGDGFRWR KYGQKVVKGN PYPRSYYRCT 420 SLKCSVRKHV ERVSDDPKAF ITTYEGKHNH DMPLRNTNPG ASEKDAQAPT TKEKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37260.1 | 1e-116 | WRKY family protein |