PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g475360.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 406aa    MW: 43783.2 Da    PI: 5.932
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g475360.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY986.3e-31174232259
                       --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                       +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+
  Pd.00g475360.m01 174 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 232
                       699************************998****************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 406 aa     Download sequence    
MEEEEEEDAK DNFGDPFSSY MRDPLLHELD ISSSSSFFSS PNSSSDMNIN ITSVDEAGGT  60
SSTFGGAHII SPSAKVPVTA CDSPLLGAAT AVSSPRGISK AVSGSISGAM VGSDMIINGN  120
SSSGKGCLLE NTGVQISSPR NPGIKRRKSQ AKKVVCIPAP AAANSRPTGE VVPSDLWAWR  180
KYGQKPIKGS PYPRGYYRCS SSKGCSARKQ VERSRTDPNM LVITYTSEHN HPWPTQRNAL  240
AGSTRSQPSK NGAGSKTSSN SSHQPHQKPA SPTKEEQNET MNDNNHVSPV ITAGSASTVK  300
EEFEDIEKQL ELDHHQFNGD HQAGFPYRPS MPDDQSNQSH HNEDFFADLG EIEADPLNLL  360
FSQCFTADEQ QKGSKAAALD PFNLFDCLKT LSFWFELNFI CGGGGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34830.14e-83WRKY family protein