PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g475360.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 406aa MW: 43783.2 Da PI: 5.932 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 98 | 6.3e-31 | 174 | 232 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+ Pd.00g475360.m01 174 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 232 699************************998****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 406 aa Download sequence |
MEEEEEEDAK DNFGDPFSSY MRDPLLHELD ISSSSSFFSS PNSSSDMNIN ITSVDEAGGT 60 SSTFGGAHII SPSAKVPVTA CDSPLLGAAT AVSSPRGISK AVSGSISGAM VGSDMIINGN 120 SSSGKGCLLE NTGVQISSPR NPGIKRRKSQ AKKVVCIPAP AAANSRPTGE VVPSDLWAWR 180 KYGQKPIKGS PYPRGYYRCS SSKGCSARKQ VERSRTDPNM LVITYTSEHN HPWPTQRNAL 240 AGSTRSQPSK NGAGSKTSSN SSHQPHQKPA SPTKEEQNET MNDNNHVSPV ITAGSASTVK 300 EEFEDIEKQL ELDHHQFNGD HQAGFPYRPS MPDDQSNQSH HNEDFFADLG EIEADPLNLL 360 FSQCFTADEQ QKGSKAAALD PFNLFDCLKT LSFWFELNFI CGGGGR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G34830.1 | 4e-83 | WRKY family protein |