PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g470780.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

SBP

Protein Properties

Length: 416aa MW: 45626.1 Da PI: 8.2776

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g470780.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	87	2.2e-27	179	247	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +CqvegC++ l +akeyhrrhkvCe+hska++v+v g+eqrf lsefDe+krsCrrrLa+hnerrrk+++ Pd.00g470780.m01 179 RCQVEGCHVPLMNAKEYHRRHKVCEMHSKASKVTVLGQEQRF---------LSEFDESKRSCRRRLAGHNERRRKSSH 247 6**************************************9.........9*********************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 416 aa Download sequence
MEIGGNMNMN MLGHDHNNNS HISSSSRGQN GNNNTYLTNW DIWGGATSTS AAATNNNSFY 60 SPAAVTVAAT AGASSSATCS EASAGGHAFI MGHPLQQQHS SFHGGGARAH YHPDPHLMCL 120 KLGKRHYFED HARAHAHALD DRHVAGLPVG VMSKRGRGGA AAQQLYGSGA TLALKVVPRC 180 QVEGCHVPLM NAKEYHRRHK VCEMHSKASK VTVLGQEQRF LSEFDESKRS CRRRLAGHNE 240 RRRKSSHDSL SRTSQEKGRF GYLSTPTGRA LSLLSARNTG FDSWVSPSDL SSRSSAALRE 300 LIAENRAAVL ARQLINSSED RNWDSSSHNH ATEDLFCDHG QSWSNSVEPQ QHQMFSDHNY 360 QHGWDRFHEG SGAHLTLDLR QAPSPAYGFL PERGKTKGED DQECDLWNSF HGASVV

Sequence ? help Back to Top

Protein Sequence Length: 416 aa Download sequence

MEIGGNMNMN MLGHDHNNNS HISSSSRGQN GNNNTYLTNW DIWGGATSTS AAATNNNSFY  60
SPAAVTVAAT AGASSSATCS EASAGGHAFI MGHPLQQQHS SFHGGGARAH YHPDPHLMCL  120
KLGKRHYFED HARAHAHALD DRHVAGLPVG VMSKRGRGGA AAQQLYGSGA TLALKVVPRC  180
QVEGCHVPLM NAKEYHRRHK VCEMHSKASK VTVLGQEQRF LSEFDESKRS CRRRLAGHNE  240
RRRKSSHDSL SRTSQEKGRF GYLSTPTGRA LSLLSARNTG FDSWVSPSDL SSRSSAALRE  300
LIAENRAAVL ARQLINSSED RNWDSSSHNH ATEDLFCDHG QSWSNSVEPQ QHQMFSDHNY  360
QHGWDRFHEG SGAHLTLDLR QAPSPAYGFL PERGKTKGED DQECDLWNSF HGASVV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42200.1	2e-26	SBP family protein