PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g470670.m02
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 474aa    MW: 51307.3 Da    PI: 7.5971
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g470670.m02genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH47.43.5e-15356401555
                       HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       hn+ Er+RRd+iN+++ +L++l+P++      K +Ka++L +++eY+k+Lq
  Pd.00g470670.m02 356 HNQSERKRRDKINQRMKTLQKLVPNS-----SKTDKASMLDEVIEYLKNLQ 401
                       9************************8.....7******************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 474 aa     Download sequence    
MNQCVPSWDL DDISTPPAPR LSLRSSTPSA DVPMLDYEVA ELTWENGQVA MHGLGLPRLQ  60
AKPSLTTAKY TTWDKPRASG TLESIVNQAT STLPPPSKPP FDSSGGGASG ELVSWFDHHR  120
TTAVRSTAVT PSTTMTMDAL VPCRNQSDNS SSHMMESMSM PVVISGSDVV GCSTGVESCS  180
GATGAATQDD DTKLSGKHGS LSNVPETPEW SSRSQSVSGS ATFGMDNQPV TLDSTKASDH  240
DSVCHSRPQR EAGDEDDRKK RSTGKSSVST KRRKHGSLSN VPETPEWSSR SQSVSGSATF  300
GMDNQPVTLD STKASDHDSV CHSRPQREAG DEDDKKKRST GKSSVSTKRS RAAAIHNQSE  360
RKRRDKINQR MKTLQKLVPN SSKTDKASML DEVIEYLKNL QAQIQMMSRM NMPAMMLPMA  420
MQQQLQMSAS ATVMPDPLSA FLACQSQPMT MDAYSMMAAM YQQFHQPPAS SSKS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1258274RKKRSTGKSSVSTKRRK
2259275RKKRSTGKSSVSTKRRK
3360365ERKRRD
4361366RKRRDK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00050.16e-45bHLH family protein