PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g470670.m02 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 474aa MW: 51307.3 Da PI: 7.5971 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 47.4 | 3.5e-15 | 356 | 401 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn+ Er+RRd+iN+++ +L++l+P++ K +Ka++L +++eY+k+Lq Pd.00g470670.m02 356 HNQSERKRRDKINQRMKTLQKLVPNS-----SKTDKASMLDEVIEYLKNLQ 401 9************************8.....7******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 474 aa Download sequence |
MNQCVPSWDL DDISTPPAPR LSLRSSTPSA DVPMLDYEVA ELTWENGQVA MHGLGLPRLQ 60 AKPSLTTAKY TTWDKPRASG TLESIVNQAT STLPPPSKPP FDSSGGGASG ELVSWFDHHR 120 TTAVRSTAVT PSTTMTMDAL VPCRNQSDNS SSHMMESMSM PVVISGSDVV GCSTGVESCS 180 GATGAATQDD DTKLSGKHGS LSNVPETPEW SSRSQSVSGS ATFGMDNQPV TLDSTKASDH 240 DSVCHSRPQR EAGDEDDRKK RSTGKSSVST KRRKHGSLSN VPETPEWSSR SQSVSGSATF 300 GMDNQPVTLD STKASDHDSV CHSRPQREAG DEDDKKKRST GKSSVSTKRS RAAAIHNQSE 360 RKRRDKINQR MKTLQKLVPN SSKTDKASML DEVIEYLKNL QAQIQMMSRM NMPAMMLPMA 420 MQQQLQMSAS ATVMPDPLSA FLACQSQPMT MDAYSMMAAM YQQFHQPPAS SSKS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 258 | 274 | RKKRSTGKSSVSTKRRK |
2 | 259 | 275 | RKKRSTGKSSVSTKRRK |
3 | 360 | 365 | ERKRRD |
4 | 361 | 366 | RKRRDK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00050.1 | 6e-45 | bHLH family protein |