PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g467110.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 285aa    MW: 32085.5 Da    PI: 10.2927
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g467110.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.25.7e-1184134146
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46 
                       +++WT+eE+  l+ +v ++G g W+tI            R+  ++k++w++
  Pd.00g467110.m01  84 KQKWTAEEEAALKAGVLKHGAGKWRTILTDPEfnsilHLRSNVDLKDKWRN 134
                       79***********************************88***********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MVQTWMVFSV IFSDPDLPIC IANSFHGFDV NLLSFSVIFS DPDLPICIAN SFHGFDVNLL  60
RVQNLTGQIS FWKIFGLWLM GAPKQKWTAE EEAALKAGVL KHGAGKWRTI LTDPEFNSIL  120
HLRSNVDLKD KWRNINVTAI WGSRQKAKLA LKRNLPNPKH DNNPLAVSTV IQSHEEIVDA  180
KPLAISGGKL QTTESKQPIA RLDHLILEAI TNLKELGGSD RAAIAMYIEE QYWAPPNLKK  240
LLSSKLKHMV ANGKLIKVKH RYRIAPTMKA LKCRRLDLDM KLAHG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67580.12e-67MYB_related family protein