PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g465610.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 485aa MW: 54575.3 Da PI: 7.0108

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g465610.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	21.8	4.4e-07	382	429	4	48
S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 WT E lvd++ ++G g+W+ I r + Rt+ +++++w+++l Pd.00g465610.m02 382 WTLSEVTTLVDGISEYGVGRWTDIKRVLFsssAYRTPIDLRDKWRNLL 429 **************************999***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 485 aa Download sequence
MDHEAHSRNK FVNMKSQRVK VEGSFAPALE DETETIEHLL AEPKSEYVTV DGVLCCGKEN 60 AGKCVDIEDF SSGYDFGLNT YSGGLHSAHP RGRYDELEFG VLDGLLDEVD EVEDIHAING 120 LASPCDDYLL DIGFTGKASE LGFGPCEKSH LGNSSSESQS PRLSGSSNGA VGISESSTVT 180 IQEFECKNNS IDKAVTHEFH GGFRRKKRRR TPVEGNVYPA SINLQNLELD NDEKTLVKEI 240 VSGENEKLSV EATKLGAFRK DKRLRKPTLR YIEEFSGKKS KDSNERENCS ALTATQDRSK 300 VRCQNEHHHM SPGILSSVPE DDSISENQTL AEFRTQRKLA KKHASILALE SDEQPITSES 360 EDDHVPKKRS RKHDRRKHQR MWTLSEVTTL VDGISEYGVG RWTDIKRVLF SSSAYRTPID 420 LRDKWRNLLR ASCGKKMKKE VEQKEMRALP KSLVSWRQYT HILGSVARSL PLPYFLLPVK 480 VLHLI

Sequence ? help Back to Top

Protein Sequence Length: 485 aa Download sequence

MDHEAHSRNK FVNMKSQRVK VEGSFAPALE DETETIEHLL AEPKSEYVTV DGVLCCGKEN  60
AGKCVDIEDF SSGYDFGLNT YSGGLHSAHP RGRYDELEFG VLDGLLDEVD EVEDIHAING  120
LASPCDDYLL DIGFTGKASE LGFGPCEKSH LGNSSSESQS PRLSGSSNGA VGISESSTVT  180
IQEFECKNNS IDKAVTHEFH GGFRRKKRRR TPVEGNVYPA SINLQNLELD NDEKTLVKEI  240
VSGENEKLSV EATKLGAFRK DKRLRKPTLR YIEEFSGKKS KDSNERENCS ALTATQDRSK  300
VRCQNEHHHM SPGILSSVPE DDSISENQTL AEFRTQRKLA KKHASILALE SDEQPITSES  360
EDDHVPKKRS RKHDRRKHQR MWTLSEVTTL VDGISEYGVG RWTDIKRVLF SSSAYRTPID  420
LRDKWRNLLR ASCGKKMKKE VEQKEMRALP KSLVSWRQYT HILGSVARSL PLPYFLLPVK  480
VLHLI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	204	210	RRKKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.2	9e-18	MYB_related family protein