PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g465610.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 484aa MW: 54518.2 Da PI: 7.0108

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g465610.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	21.8	4.4e-07	381	428	4	48
S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 WT E lvd++ ++G g+W+ I r + Rt+ +++++w+++l Pd.00g465610.m01 381 WTLSEVTTLVDGISEYGVGRWTDIKRVLFsssAYRTPIDLRDKWRNLL 428 **************************999***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 484 aa Download sequence
MDHEAHSRNK FVNMKSQRVK VEGSFAPALE DETETIEHLL AEPKSEYVTV DGVLCCGKEN 60 AGKCVDIEDF SSGYDFGLNT YSGLHSAHPR GRYDELEFGV LDGLLDEVDE VEDIHAINGL 120 ASPCDDYLLD IGFTGKASEL GFGPCEKSHL GNSSSESQSP RLSGSSNGAV GISESSTVTI 180 QEFECKNNSI DKAVTHEFHG GFRRKKRRRT PVEGNVYPAS INLQNLELDN DEKTLVKEIV 240 SGENEKLSVE ATKLGAFRKD KRLRKPTLRY IEEFSGKKSK DSNERENCSA LTATQDRSKV 300 RCQNEHHHMS PGILSSVPED DSISENQTLA EFRTQRKLAK KHASILALES DEQPITSESE 360 DDHVPKKRSR KHDRRKHQRM WTLSEVTTLV DGISEYGVGR WTDIKRVLFS SSAYRTPIDL 420 RDKWRNLLRA SCGKKMKKEV EQKEMRALPK SLVSWRQYTH ILGSVARSLP LPYFLLPVKV 480 LHLI

Sequence ? help Back to Top

Protein Sequence Length: 484 aa Download sequence

MDHEAHSRNK FVNMKSQRVK VEGSFAPALE DETETIEHLL AEPKSEYVTV DGVLCCGKEN  60
AGKCVDIEDF SSGYDFGLNT YSGLHSAHPR GRYDELEFGV LDGLLDEVDE VEDIHAINGL  120
ASPCDDYLLD IGFTGKASEL GFGPCEKSHL GNSSSESQSP RLSGSSNGAV GISESSTVTI  180
QEFECKNNSI DKAVTHEFHG GFRRKKRRRT PVEGNVYPAS INLQNLELDN DEKTLVKEIV  240
SGENEKLSVE ATKLGAFRKD KRLRKPTLRY IEEFSGKKSK DSNERENCSA LTATQDRSKV  300
RCQNEHHHMS PGILSSVPED DSISENQTLA EFRTQRKLAK KHASILALES DEQPITSESE  360
DDHVPKKRSR KHDRRKHQRM WTLSEVTTLV DGISEYGVGR WTDIKRVLFS SSAYRTPIDL  420
RDKWRNLLRA SCGKKMKKEV EQKEMRALPK SLVSWRQYTH ILGSVARSLP LPYFLLPVKV  480
LHLI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	203	209	RRKKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.2	9e-18	MYB_related family protein