PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g465480.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

ARF

Protein Properties

Length: 699aa MW: 76888 Da PI: 6.81

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g465480.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	74.3	1.4e-23	117	218	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 f k+lt+sd+++ g +++p+ +ae++ ++ + t+ +d +g++W++++iyr++++r++lt+GW+ Fv+ ++L +gD++vF + Pd.00g465480.m01 117 FAKTLTQSDANNGGGFSVPRYCAETIfprldysADPPVQ--TILAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNHKKLVAGDSIVFL--R 205 89**************************996555555..89*******************************************..4 PP SSEE..EEEEE-S CS B3 87 rsefelvvkvfrk 99 +++ l+v+++r+ Pd.00g465480.m01 206 AENGDLCVGIRRA 218 488999**997 PP
2	Auxin_resp	114.2	1.2e-37	286	369	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa as++++FevvY+Prast+eF+vk++ v++al++++++GmRfkmafetedss++++ +Gt+++v+ ++p+rWp+S+Wr+L+ Pd.00g465480.m01 286 AAALASKGQPFEVVYYPRASTPEFCVKASLVKAALQIRWCPGMRFKMAFETEDSSRISWfMGTISSVQVAEPLRWPESPWRLLQ 369 67889*****************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 699 aa Download sequence
MDSKEKLKEG EKCLDPQLWH ACAGGMVQMP PVNAKVFYFP QGHAEHACGA VDFRNCPRVP 60 PYIFCRVSAI KFMADPETDE VYAKIRLVPL SASEAGYEDD GIGGLNGSET PDKPASFAKT 120 LTQSDANNGG GFSVPRYCAE TIFPRLDYSA DPPVQTILAK DVHGETWKFR HIYRGTPRRH 180 LLTTGWSTFV NHKKLVAGDS IVFLRAENGD LCVGIRRAKR GIGGGPESSS GWNPTGGNCT 240 MPYGGYSAFF REDENKLMRN CNGNGSNLNG SLMGKGKVGP ESVFEAAALA SKGQPFEVVY 300 YPRASTPEFC VKASLVKAAL QIRWCPGMRF KMAFETEDSS RISWFMGTIS SVQVAEPLRW 360 PESPWRLLQV TWDEPDLLQN VKRVSPWLVE LVSNMPAIHL TPFSPPRKKM RQTQHPDFPF 420 EGQLPMPTFS GNLLGPSSPF GCLPDKTPAG MQGARHGHYG LSLSDMHLNK LQTGLFPAGF 480 TPLDHAATAT KFSNNTMTQK PTMSENVSCL LTMAHSTQTS KKPDDVKPPQ LVLFGQPILT 540 EQQISLSCSG DTVSPVLTGN SSSDGNAEKT ANLSDNSVSA LHQQSLQERS YCEGFQWYKD 600 TRHETEPSLE TGHCKVFMES EDVGRTLDLS VFGSYDELYR KLADMFGIEN SETLNHVLYR 660 DATGAVKHIG DEPLSCSDFM KTARRLTILM DSGSNNVGM

Sequence ? help Back to Top

Protein Sequence Length: 699 aa Download sequence

MDSKEKLKEG EKCLDPQLWH ACAGGMVQMP PVNAKVFYFP QGHAEHACGA VDFRNCPRVP  60
PYIFCRVSAI KFMADPETDE VYAKIRLVPL SASEAGYEDD GIGGLNGSET PDKPASFAKT  120
LTQSDANNGG GFSVPRYCAE TIFPRLDYSA DPPVQTILAK DVHGETWKFR HIYRGTPRRH  180
LLTTGWSTFV NHKKLVAGDS IVFLRAENGD LCVGIRRAKR GIGGGPESSS GWNPTGGNCT  240
MPYGGYSAFF REDENKLMRN CNGNGSNLNG SLMGKGKVGP ESVFEAAALA SKGQPFEVVY  300
YPRASTPEFC VKASLVKAAL QIRWCPGMRF KMAFETEDSS RISWFMGTIS SVQVAEPLRW  360
PESPWRLLQV TWDEPDLLQN VKRVSPWLVE LVSNMPAIHL TPFSPPRKKM RQTQHPDFPF  420
EGQLPMPTFS GNLLGPSSPF GCLPDKTPAG MQGARHGHYG LSLSDMHLNK LQTGLFPAGF  480
TPLDHAATAT KFSNNTMTQK PTMSENVSCL LTMAHSTQTS KKPDDVKPPQ LVLFGQPILT  540
EQQISLSCSG DTVSPVLTGN SSSDGNAEKT ANLSDNSVSA LHQQSLQERS YCEGFQWYKD  600
TRHETEPSLE TGHCKVFMES EDVGRTLDLS VFGSYDELYR KLADMFGIEN SETLNHVLYR  660
DATGAVKHIG DEPLSCSDFM KTARRLTILM DSGSNNVGM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	0.0	ARF family protein