PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g464870.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 294aa MW: 32432.6 Da PI: 8.4161 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 43.6 | 7.1e-14 | 36 | 80 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT eE++++++a +++ + Wk+I +g +t q++s+ qky Pd.00g464870.m01 36 RESWTDEEHDKFLEALQLFDRD-WKKIEDFVG-SKTVIQIRSHAQKY 80 789*****************77.*********.*************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 294 aa Download sequence |
MNSTSSNNPQ SMGAASTPSD GSGKKVRKPY TITKSRESWT DEEHDKFLEA LQLFDRDWKK 60 IEDFVGSKTV IQIRSHAQKY FLKVQKSGTT AHVPPPRPKR KAAHPYPQKA SKNVLVPLQA 120 SIAYPSSMNA IASTYFPWDE TSIMINPASN QILLSHEEFT SFQGTEADIR SKGLAGINKC 180 SLSGIESSSK TLPSSEIPEQ GKQAPLLHGI PDFSEVYSFI GSVFDPDSKG HAQKLREMDP 240 INFETVLLLM RNLSINLSSP DFEPIREVLV SYDVNTKTVA AGIVTTKLNN DLSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G09600.1 | 1e-118 | MYB_related family protein |