PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g463130.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 184aa MW: 20729.1 Da PI: 4.8137 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 96.2 | 2.2e-30 | 37 | 95 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+++ gC++kk+vers++d +v++itY+ +Hnh+ Pd.00g463130.m01 37 SDSWSWRKYGQKPIKGSPYPRGYYRCSTSkGCSAKKQVERSKTDASVLIITYTCSHNHP 95 69************************9988****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 184 aa Download sequence |
MDETLSPEPD SEVPKELRPE VKIGTNVGKL KNEGPPSDSW SWRKYGQKPI KGSPYPRGYY 60 RCSTSKGCSA KKQVERSKTD ASVLIITYTC SHNHPGPDSP IRSSQNIMID QEEDPFLEKT 120 HVSSTLGFLL DEEPLSYSQL MSFSTPKSEE NDFFDELEEL PTFSSFPSFM RSNLSLERIP 180 SVPS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58710.2 | 1e-34 | WRKY family protein |