PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g461630.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

ARR-B

Protein Properties

Length: 574aa MW: 62940.1 Da PI: 5.4703

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g461630.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	46.4	8.8e-15	188	216	27	55
G2-like 27 AtPktilelmkvkgLtlehvkSHLQkYRl 55 A+Pk+il+lm+v+gLt+e+v+SHLQkYRl Pd.00g461630.m01 188 AVPKKILDLMNVQGLTRENVASHLQKYRL 216 9***************************8 PP
2	Response_reg	84.4	3.3e-28	26	134	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 vl vdD+p+ ++ll+ +l++ +y +v++++ + eal +l+e++ +Dl+++D++mp+mdG++ll+ + e +lp+i++++h+++e++ + ++ Pd.00g461630.m01 26 VLAVDDNPICLRLLEGLLQNCQY-QVTTTTRAVEALLMLRESRnrFDLVITDVSMPDMDGFKLLELLGLEM-DLPVIMLSGHSDKELVMKGIS 116 799******************.9999*******998889*****************96644.8**************** PP TTESEEEESS--HHHHHH CS Response_reg 92 aGakdflsKpfdpeelvk 109 Ga d+l Kp+ +eel++ Pd.00g461630.m01 117 HGACDYLLKPVRKEELTN 134 *************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 574 aa Download sequence
MSVKAQRGGL VGEDGAMDRF PVGMRVLAVD DNPICLRLLE GLLQNCQYQV TTTTRAVEAL 60 LMLRESRNRF DLVITDVSMP DMDGFKLLEL LGLEMDLPVI MLSGHSDKEL VMKGISHGAC 120 DYLLKPVRKE ELTNIWQHVI RRKKFDSKDQ NKSSSQDKAC HETGEGGQGI IFLTNVSSPL 180 FLNLYAGAVP KKILDLMNVQ GLTRENVASH LQKYRLCLKR LSSTATQQAS MVAAFGGKDS 240 SYMRMGALDG FGDLRSLAGS QRLSNATLSP YTPGGMLGRL NSPAGLSIRG ITSSGLVQPG 300 HSQNLSNSIS NLVKLQPALP ANQSPNLYES IPTSLELNQL QQGKHTAHIG ESNPNNDPTS 360 YSIPSSFPDT SVSVSSIHSD SITSSNPLIL HRNPQQALGM GVFGNQSSLS LASLNPESFD 420 IGISSNFLDD NRCSESWQVA VQLSKFPSND LPMSPAEELR GNMWNQEGLI GDVVPTMDCT 480 PEQRWEEHKR DYNHNLNLTF SATNPTVSAN VILSEVEKSA TGTKMKPSED YLWEQTKSHD 540 GLVQNSYESL NDIMGAIMKG GQNENMLMDE EFWI

Sequence ? help Back to Top

Protein Sequence Length: 574 aa Download sequence

MSVKAQRGGL VGEDGAMDRF PVGMRVLAVD DNPICLRLLE GLLQNCQYQV TTTTRAVEAL  60
LMLRESRNRF DLVITDVSMP DMDGFKLLEL LGLEMDLPVI MLSGHSDKEL VMKGISHGAC  120
DYLLKPVRKE ELTNIWQHVI RRKKFDSKDQ NKSSSQDKAC HETGEGGQGI IFLTNVSSPL  180
FLNLYAGAVP KKILDLMNVQ GLTRENVASH LQKYRLCLKR LSSTATQQAS MVAAFGGKDS  240
SYMRMGALDG FGDLRSLAGS QRLSNATLSP YTPGGMLGRL NSPAGLSIRG ITSSGLVQPG  300
HSQNLSNSIS NLVKLQPALP ANQSPNLYES IPTSLELNQL QQGKHTAHIG ESNPNNDPTS  360
YSIPSSFPDT SVSVSSIHSD SITSSNPLIL HRNPQQALGM GVFGNQSSLS LASLNPESFD  420
IGISSNFLDD NRCSESWQVA VQLSKFPSND LPMSPAEELR GNMWNQEGLI GDVVPTMDCT  480
PEQRWEEHKR DYNHNLNLTF SATNPTVSAN VILSEVEKSA TGTKMKPSED YLWEQTKSHD  540
GLVQNSYESL NDIMGAIMKG GQNENMLMDE EFWI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G25180.1	3e-48	ARR-B family protein