PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g459960.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB | ||||||||
Protein Properties | Length: 299aa MW: 32980.6 Da PI: 4.7674 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 26.2 | 1.8e-08 | 7 | 36 | 19 | 48 |
TTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 19 lGggtWktIartmgkgRtlkqcksrwqkyl 48 G g+W+ +ar g+ R++k+c++rw +yl Pd.00g459960.m01 7 NGQGCWSDVARNAGLQRCGKSCRLRWINYL 36 58889***********************97 PP | |||||||
2 | Myb_DNA-binding | 52.6 | 1.1e-16 | 42 | 85 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E+el+++++ +lG++ W+ Ia++++ gRt++++k++w++ Pd.00g459960.m01 42 RGAFSPQEEELIIHLHSLLGNR-WSQIAARLP-GRTDNEIKNFWNS 85 89********************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 299 aa Download sequence |
MSYMINNGQG CWSDVARNAG LQRCGKSCRL RWINYLRPDL KRGAFSPQEE ELIIHLHSLL 60 GNRWSQIAAR LPGRTDNEIK NFWNSTIKKR LKNLSSSNAS PNTSDSSSEP KDHHAMLAGG 120 FIPGQEHGMM PLYMDSSPSL MQSTVLNHMF DPLPMLDHAG LTLPGGAGGY YNATPCTTQI 180 NGVGGDCCFG DNGVFGVGGG VDIGVEGEIF VPALECVSTE DQNLKTEPIY DHRNTTNSNY 240 YNNINSITNT NYNNNIKVEN IGVGNYYDDQ EELTVGEWDL EDLMKDVSSA SFPFLDHQS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G08500.1 | 2e-51 | MYB family protein |