PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g459770.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NF-YA
Protein Properties Length: 190aa    MW: 20666.7 Da    PI: 10.5583
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g459770.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA104.11.2e-321470158
         CBFB_NFYA  1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58
                      +ep+YVNaKQyq+Il+RRq+Rak+e e+kl +k rkpylheSRh+hA+rR+Rg+gGrF
  Pd.00g459770.m01 14 QEPVYVNAKQYQGILRRRQARAKAELERKL-IKVRKPYLHESRHQHAMRRARGTGGRF 70
                      69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MPHARMPLPL EMAQEPVYVN AKQYQGILRR RQARAKAELE RKLIKVRKPY LHESRHQHAM  60
RRARGTGGRF AKKTNGDKSN STGQEKGTGS GPAHSSQSGS SSGSEPFPSD SAETWNSSNS  120
QQEGRGSQVH DAYSAHNYAN GSGCFQTHGG LQASMYASYS GKRGEEGDCT GQQRGSISSS  180
QASQRRLAIQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20910.13e-53NF-YA family protein