PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g456360.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 345aa    MW: 38044.2 Da    PI: 6.6028
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g456360.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.33.7e-182370148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+WT+ Ed++l ++v+++G g+W+++ r  g++R++k+c++rw ++l
  Pd.00g456360.m01 23 KGPWTAVEDQILMEYVRKHGEGNWNAVQRNSGLNRCGKSCRLRWANHL 70
                      79******************************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    
MTPSSSNNNS GLLQQSEGRG LKKGPWTAVE DQILMEYVRK HGEGNWNAVQ RNSGLNRCGK  60
SCRLRWANHL RPNLKKGAFS PDEERLILEL HANNPTTTSS FSSFTFHRPA PILGAPVRYK  120
RYRDSVGFSP PVSPTPQRST SILRANSMPD IASSHLTSTN SMPESAAFQF PRTLNPSLPP  180
LPSSRTQFEY SESFLSSTGS VYSVKSELPS SQVSQTQSEV TIDTKRANGL FSSFEEKHVL  240
DNYTRWLQST SSMEGSLLEA KPIQDDQISS LPEDLSKLFN FIPSTEPISD WYSDSGELSN  300
GHSSGVTDAC LDFDMQQHMA SLFPVTATAE HGKASSSWDN LPGIC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G32460.12e-42MYB family protein