PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g455260.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 352aa    MW: 38948.3 Da    PI: 9.7358
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g455260.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.16.5e-13287332655
                       HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +++Er RR ri +++ +L+el+P+     +k  + a++L +AveYIk+Lq
  Pd.00g455260.m01 287 SIAERVRRTRISERMRKLQELVPNM----DKQTNTADMLDLAVEYIKDLQ 332
                       689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    
MESDLQQHHH KPQQHMNSSL MRWWGRRRNR RNCITSQRVI QQQQSHLNNY SSVSQGFYQS  60
PSSKPPLPNQ SLNSANEGAY SMGTSQLPSV KTGGVTNSNL IRHSSSPAGL FSHMNIDVAG  120
YAALRGMGNY GASNSTNEEA SFSSTSRLKN FSSGPPSTSG LMSPIAEIGN KRMRSDNQDS  180
RGFGDGSGNN YVTGFPIDSW DDSAMMSDGI TRSTSFREDD IKAFTGLSSS ETQDVEAGNR  240
PPTLLAHHLS LPKTSAEMAA VEKFMQFQDS VPCKIRAKRG CATHPRSIAE RVRRTRISER  300
MRKLQELVPN MDKQTNTADM LDLAVEYIKD LQTQVQTLSD NRAKCTCSSK QQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.11e-73bHLH family protein