PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g453310.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 359aa    MW: 39709.8 Da    PI: 4.5145
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g453310.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.67.6e-19112161255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       +y+G+r+++ +g+W+AeIrdp++     r++lg+f taeeAa+a++  +++++g
  Pd.00g453310.m01 112 QYRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDSEARRIRG 161
                       69*******.**********954...4************************998 PP

Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    
MCGGAIISDF IAPTRSRLTA DYLWPDLKKS SSGKRFSKPL RPEIVDLGDD FEADFQEFKD  60
ESDVDEDDEM VEAKPSAFSA GKPSSARGST TVKSVEFNGQ AEKSAKRKRK NQYRGIRQRP  120
WGKWAAEIRD PRKGVRVWLG TFNTAEEAAR AYDSEARRIR GKKAKVNFPD ETPRSSAKRS  180
VKDYYNAMGF LDEKPATNDF GFMSTFPANG EVVLKSSAPS DAVPLYFSSD QGSNSFDCSD  240
FGWGEQGSKT PEISSVLSSV MEESDDSLFL EDANPTKKLK SNPDDLVPVQ DNAGKTLSDE  300
LSAFEMKYFQ TPYLDGSWDA SVDAFLSADA TQDGGNSVDL WSFEDLLHDG FLCVWSASC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53910.11e-76ERF family protein