PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g446760.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 270aa    MW: 31353.4 Da    PI: 7.5961
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g446760.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR183.92.6e-26105193290
              FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       fY+eYA++vGF +r+ + ++s+r+g+i  r++ C+keg+  + + k    r++ra+tr gCka+++vk +k++kw++tk+ ++HnH+l+
  Pd.00g446760.m01 105 FYDEYARRVGFVMRVMSCRRSERDGRILARRLGCNKEGHCVSIRGKFGPVRKPRASTREGCKAMIHVKYDKSSKWVITKFIKDHNHPLV 193
                       9**************************************99999998****************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MSSENHDRWQ GKIDVVFGEL LFQPDDIAIV VKRHSHFEAF TSQRNFHSRP ENEDLLSLLE  60
SMDSDEGARA VESSSSQALV LYEADSILEP YEGMEFESED AAKIFYDEYA RRVGFVMRVM  120
SCRRSERDGR ILARRLGCNK EGHCVSIRGK FGPVRKPRAS TREGCKAMIH VKYDKSSKWV  180
ITKFIKDHNH PLVVSPREAR QTMDEKDKKI QELTAELRNK KRLCTTYQEQ LTAFTKIVEE  240
YSDQLSKKVQ NVVSNLKEFE SIDRELSQHR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.11e-109FAR1 family protein