PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g443440.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 154aa    MW: 17430 Da    PI: 4.6402
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g443440.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B340.16.7e-1339127196
                       EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE.E-SSSEE.. CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk.ldgrsefel 92 
                       f+ vlt+ +  ++ +lv+p +f ++      +s   t+ + +g+ We+ +   ++s+r  l  +Wk F+ +n+Lk+gD +vF+ l+  s+++l
  Pd.00g443440.m01  39 FDVVLTKTNIERLYQLVVPGRFSATLP---SCS-IPTVLTFRGKNWEMIY--YGSSSRKRLD-NWKAFAIDNNLKVGDACVFEqLEC-SSTRL 123
                       677888888889999*******97773...344.4577889*********..8888888898.********************5444.55555 PP

                       EEEE CS
                B3  93 vvkv 96 
                       v++v
  Pd.00g443440.m01 124 VFRV 127
                       5443 PP
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    
MTNHPLMKGE PQMGDQLTSN PVIELEGDEF WPLSGKPFFD VVLTKTNIER LYQLVVPGRF  60
SATLPSCSIP TVLTFRGKNW EMIYYGSSSR KRLDNWKAFA IDNNLKVGDA CVFEQLECSS  120
TRLVFRVQIL RGDIPSEFLD KLDGDNVDAP IVLE