PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g442590.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 447aa MW: 49764.3 Da PI: 6.4204

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g442590.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.1	2.7e-12	246	292	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h + E+ RR ++N ++ Lr llP++ +K + a+i+ +A++YIk+L Pd.00g442590.m01 246 TKHFATEKHRRVQLNGKYTALRNLLPHP-----TKSDRASIVGEAIDYIKEL 292 78************************.....9**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 447 aa Download sequence
MPSPSETHNN NNNSFAVAEN LRLSMEEFSY PHQQDHHAAM EIELQNELGF NPYSTNTDQN 60 NNSSHLVSFE QQTNWDNIHG VHDQMQQQLQ DGANGAYPPT PDLLNLFSLP RCSPSSVLQN 120 SSITFTNPNP KSSNFPNSLG FHGDVHGGID TPPGTASSVL YDPLFHLNLP PQPPLFRELL 180 QSLPHGYSLP GSRNGSLFTS GGDEGEGIGG GVYSDGINNG RQFENGVLEF SREMGSIGRG 240 RDVKGTKHFA TEKHRRVQLN GKYTALRNLL PHPTKSDRAS IVGEAIDYIK ELLRTVEELK 300 LLVEKKRCGR ERSKRRRTEQ DGGAGDDESC NMKPLGDPHD QYGSLRSSWL QRKSKDTEVD 360 IRIIDDEVTI KLVQRKKINL LLYVSKLLDE LQLDLHHVAG GHIGNSYSFL FNTKMYEGSS 420 LYASAIAQKL IEVLDKQYAA VPPTNSF

Sequence ? help Back to Top

Protein Sequence Length: 447 aa Download sequence

MPSPSETHNN NNNSFAVAEN LRLSMEEFSY PHQQDHHAAM EIELQNELGF NPYSTNTDQN  60
NNSSHLVSFE QQTNWDNIHG VHDQMQQQLQ DGANGAYPPT PDLLNLFSLP RCSPSSVLQN  120
SSITFTNPNP KSSNFPNSLG FHGDVHGGID TPPGTASSVL YDPLFHLNLP PQPPLFRELL  180
QSLPHGYSLP GSRNGSLFTS GGDEGEGIGG GVYSDGINNG RQFENGVLEF SREMGSIGRG  240
RDVKGTKHFA TEKHRRVQLN GKYTALRNLL PHPTKSDRAS IVGEAIDYIK ELLRTVEELK  300
LLVEKKRCGR ERSKRRRTEQ DGGAGDDESC NMKPLGDPHD QYGSLRSSWL QRKSKDTEVD  360
IRIIDDEVTI KLVQRKKINL LLYVSKLLDE LQLDLHHVAG GHIGNSYSFL FNTKMYEGSS  420
LYASAIAQKL IEVLDKQYAA VPPTNSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31210.1	9e-87	bHLH family protein