PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g441530.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family Trihelix
Protein Properties Length: 309aa    MW: 34927.1 Da    PI: 8.0617
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g441530.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix68.41.4e-2138132185
          trihelix   1 rWtkqevlaLiearremeerlrrgk..........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfd 83 
                       rWt++e+ +Lie+++ +e+++++g+            +p+W+ vs+++++rg++r+p+qC+++w+nl  ++kki+++e++ +  ++s +++ +
  Pd.00g441530.m01  38 RWTRHETFVLIEGKKVVENAVQKGRsrsssalgsdHFEPKWDLVSSYCKQRGVSREPVQCRKRWSNLLVDFKKIRNWESQIKGAAESFWVMRN 130
                       8*********************986666777777688*******************************************9888888888877 PP

          trihelix  84 ql 85 
                       ++
  Pd.00g441530.m01 131 DV 132
                       65 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MALDSIKHEG ASSTTPDQVD RQQVPNGSSD DRAKRHPRWT RHETFVLIEG KKVVENAVQK  60
GRSRSSSALG SDHFEPKWDL VSSYCKQRGV SREPVQCRKR WSNLLVDFKK IRNWESQIKG  120
AAESFWVMRN DVRKERKLPG FFDREVYNIL DGNAVTATAA CPLALFIPVQ RDAQSEDGLC  180
SDSEKSEQEE TESKKENLMQ DSPATTVTTP MPSSGTIKEK RGLDSNTCGE HISQEKRKQR  240
RLAIDGCEDN YSDQLISVLE RNNALLNAQL EARNINCHLD REQRKEQSNS LLAAISKVTD  300
ALVRIADKL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1235242EKRKQRRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.11e-82Trihelix family protein