PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g441470.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 488aa MW: 53097.5 Da PI: 6.2507

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g441470.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36	1.2e-11	303	345	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A+eY+k+L Pd.00g441470.m01 303 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIEYLKEL 345 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 488 aa Download sequence
MLPRLNGAVW MGDREDRDSA SWNRTTGATT NNSNCGVVES KDELGSLSTF KSMLDVDDDW 60 YLPNNSIQSH SDVRDIAFSP SFADPESLLL NPVDSSSSCS PSSSVFNNLD PNQVHYYLPQ 120 NSTLSSLLNV VPNNPLEHGF DLGCDIGFLD TQASSGSSLM NRGGGVLTGF SGLSSNNQMN 180 AQDLCSNLQF STTRLPQLLE NSSNFTGFRG FEDTSANALF PNRPKLLRPL DSVPDVGAPP 240 TLFQKRVQKN LADNGGNLDD FTENTKMDDG AKNGGNSSNA NSTVTGGGDH KGKKKGLPAK 300 NLMAERRRRK KLNDRLYMLR SVVPKISKMD RASILGDAIE YLKELLQKIN NLHNELESIP 360 PGSSLTPTGS TFHPLTPTPA TLPSRIKEEL CPSSLPSPNG QPARVEVRLR EGRAVNIHMF 420 CGRRPGLLLS TMRTLDSLGL DIQQAVISCF NGFAMDVFRA EQCKEGQDVH PDQIKAVLLE 480 SVGFHGLI

Sequence ? help Back to Top

Protein Sequence Length: 488 aa Download sequence

MLPRLNGAVW MGDREDRDSA SWNRTTGATT NNSNCGVVES KDELGSLSTF KSMLDVDDDW  60
YLPNNSIQSH SDVRDIAFSP SFADPESLLL NPVDSSSSCS PSSSVFNNLD PNQVHYYLPQ  120
NSTLSSLLNV VPNNPLEHGF DLGCDIGFLD TQASSGSSLM NRGGGVLTGF SGLSSNNQMN  180
AQDLCSNLQF STTRLPQLLE NSSNFTGFRG FEDTSANALF PNRPKLLRPL DSVPDVGAPP  240
TLFQKRVQKN LADNGGNLDD FTENTKMDDG AKNGGNSSNA NSTVTGGGDH KGKKKGLPAK  300
NLMAERRRRK KLNDRLYMLR SVVPKISKMD RASILGDAIE YLKELLQKIN NLHNELESIP  360
PGSSLTPTGS TFHPLTPTPA TLPSRIKEEL CPSSLPSPNG QPARVEVRLR EGRAVNIHMF  420
CGRRPGLLLS TMRTLDSLGL DIQQAVISCF NGFAMDVFRA EQCKEGQDVH PDQIKAVLLE  480
SVGFHGLI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	293	311	KKKGLPAKNLMAERRRRKK
2	305	312	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	1e-128	bHLH family protein