PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g441380.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 330aa    MW: 36573.1 Da    PI: 8.2147
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g441380.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.42.6e-08174221455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +h+ +Er RR++i +++  L++l+P +    +k    a +L + ++Y++sLq
  Pd.00g441380.m01 174 SHSLAERVRREKISERMKMLQRLVPGC----DKVTGRAVMLDEIINYVQSLQ 221
                       8*************************9....55599***************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MAAFSYHPAF LLDSIFLPYT PNNINIDDHF SPSYPSEPLI QEVHNTDSRA VESSCTVDHS  60
SAKVSLSDNE PSVTKKQSTE SSTVVDKLET GEQVTQKVTS MDKKRKNRNG SSLNSAQSKA  120
SREHKGKKQK KLDGAEKAEE KKAKSDKKDQ VKVGDEPPTG YIHVRARRGQ ATDSHSLAER  180
VRREKISERM KMLQRLVPGC DKVTGRAVML DEIINYVQSL QNQVEFLSMK LASVNPLFYD  240
FGMDLGALMV KPERLSSMAS PYPSVPQCSP TQPTAFADTS TNITTFSTAN NYPFLDGSAS  300
ILLQQGQRPN DFSQDNESLI CPHKHTGICL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1103130KKRKNRNGSSLNSAQSKASREHKGKKQK
2103144KKRKNRNGSSLNSAQSKASREHKGKKQKKLDGAEKAEEKKAK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.29e-58bHLH family protein