PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g435450.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 290aa MW: 31894.5 Da PI: 5.4219 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.3 | 3.9e-18 | 31 | 81 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++ GVr+++ +g+WvAeI+d +n + r +lg+f ta+eAa+a+++a+ l+g Pd.00g435450.m01 31 CKFVGVRQRP-SGKWVAEIKDT-TN--KIRMWLGTFETADEAARAYDEAAYLLRG 81 799*******.7*********3.33..5**********************99997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 290 aa Download sequence |
MEEEHEEAPK QQKENGVSVS ANKQSKLKTK CKFVGVRQRP SGKWVAEIKD TTNKIRMWLG 60 TFETADEAAR AYDEAAYLLR GSNTRTNFST HVPSNSPLSL KIRNLLNHKK SLNLKQKQSP 120 PPTPNSSLKS TPIAATTTRI SSGSSLCSGN IQAFSDTSSD NCNANSSSSL PCYKSQDIQA 180 FDDAYRPDLS NCIGELQPAM FHLDQSWPFL AGFDQLPLTH EGMDLTKGIG NVAAAEAEAE 240 VTEFERLKVE RQISASIYAM NGGNEYVDNE YDGSDALWDL PTLSQLFCLG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G19790.1 | 8e-50 | ERF family protein |