PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g434640.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | C2H2 | ||||||||
Protein Properties | Length: 351aa MW: 37806.1 Da PI: 7.735 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.5 | 2.4e-05 | 176 | 199 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 y+C++C ++F+++ + +H r+ H Pd.00g434640.m01 176 YTCSKCRRVFKTSQFFASHARSvH 199 9********************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 351 aa Download sequence |
MPRSRVHIHT FIDINEPAAA QGLGGSPHLL LAQPSRNSPH LLLAQPSSSS SLRAREEPPT 60 VISIESDDAV SSSDDEPIVA EPISVYIPTP QPKPSEYQSK EPTPEAPTNF QNLNSPNSDD 120 ARRDQSNGQR ELPPSGGDGD VGDLLVVPDE HVDQVAVCDL GDGKTRSLKH DKNGPYTCSK 180 CRRVFKTSQF FASHARSVHP RSPEEIARGE ALKADRKSKK RSASMKEKDP EPKQKRSRVS 240 KKSVTMKEKD QEQVVAASGF AGYGSGGADS TVTIVLPHGE SYSHETIRAK KRKARSMNVP 300 AAVAPDSGGA GDGQVGVKIG KKKDSEKAGP SGYGGMEFEG LYEVEVQMEH K |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22990.1 | 7e-09 | C2H2 family protein |