PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g434520.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 554aa MW: 62063.3 Da PI: 10.3616

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g434520.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33.5	9.8e-11	11	65	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.........TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg.........kgRtlkqcksrwqkyl 48 +W t E++llv+av+++G+++W+++a +++ + +t+ +c++++ +++ Pd.00g434520.m01 11 PWGTLEELLLVCAVNRHGTKSWDSVAMEVQtkssstfasTLLTAQDCRDKFDNLK 65 7************************************99*******98875 PP

Sequence ? help Back to Top
Protein Sequence Length: 554 aa Download sequence
MAREHGTSGH PWGTLEELLL VCAVNRHGTK SWDSVAMEVQ TKSSSTFAST LLTAQDCRDK 60 FDNLKRRFVS KNDSQSHSLG QMVDELRNLR VDELRHEDLQ SGGEDQLEAS PENIAGETNS 120 GEDFDSDERE NRSFNESNST SQRGEAKENS VEDNKKGGET VGATQLGESN EFWESVSESK 180 REGKRGGVAS KQNSDVQSSA SLSKRKRQAE GDEVSPATSK GIKPKLVKHE PLIKVLRIIR 240 SHRLGSVFER RLRSQESDRY KSLIRQHMDL HEVQSRLNKG VYTDCTHKFF RDLLLLFNNA 300 VVFLRKTSPE HMAAQELRSI VLKEMKDQLQ KPQPAIDMVK LHAPKLESKV PKIEPDSSVK 360 PSKPSVVACG LRRSANGGGG AKNRKGDKKE RGEVEEKGKA SEVEDKGIRK KRTQERGWRR 420 GSRRDSSKNV GKTEHAYGGN ELSSHDGLEE MKMEKIENAK MTKQGAARTF LKRMKQNSTS 480 IEVKRGTSDV SERGESEDSM VEEDDKKQKG KTKPDERKKR VTRKAGNGSG KRGRGNGEAD 540 QMGSAGRPRK RTRR

Sequence ? help Back to Top

Protein Sequence Length: 554 aa Download sequence

MAREHGTSGH PWGTLEELLL VCAVNRHGTK SWDSVAMEVQ TKSSSTFAST LLTAQDCRDK  60
FDNLKRRFVS KNDSQSHSLG QMVDELRNLR VDELRHEDLQ SGGEDQLEAS PENIAGETNS  120
GEDFDSDERE NRSFNESNST SQRGEAKENS VEDNKKGGET VGATQLGESN EFWESVSESK  180
REGKRGGVAS KQNSDVQSSA SLSKRKRQAE GDEVSPATSK GIKPKLVKHE PLIKVLRIIR  240
SHRLGSVFER RLRSQESDRY KSLIRQHMDL HEVQSRLNKG VYTDCTHKFF RDLLLLFNNA  300
VVFLRKTSPE HMAAQELRSI VLKEMKDQLQ KPQPAIDMVK LHAPKLESKV PKIEPDSSVK  360
PSKPSVVACG LRRSANGGGG AKNRKGDKKE RGEVEEKGKA SEVEDKGIRK KRTQERGWRR  420
GSRRDSSKNV GKTEHAYGGN ELSSHDGLEE MKMEKIENAK MTKQGAARTF LKRMKQNSTS  480
IEVKRGTSDV SERGESEDSM VEEDDKKQKG KTKPDERKKR VTRKAGNGSG KRGRGNGEAD  540
QMGSAGRPRK RTRR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	507	519	KQKGKTKPDERKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44430.1	2e-40	MYB_related family protein