PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g434140.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 330aa MW: 36962.2 Da PI: 10.2282 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 99.5 | 2.1e-31 | 262 | 320 | 3 | 60 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhek 60 D y+WrKYGqK++kgs++prsYY+C+s gCp++k+ver+ edp+++++tYeg+H+h+k Pd.00g434140.m01 262 DDYTWRKYGQKPIKGSPYPRSYYKCSSVrGCPARKHVERCLEDPTMLVVTYEGDHQHPK 320 99************************988****************************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 330 aa Download sequence |
MNPGLDFKIH EAAQSSLKHA HHLFGCVSEN KQKRSVQEVS LIAQDAVEEF RKLLALLDGS 60 LLSNQKRIRR GPLPKSHDIN QVELLDSPNP SSQNTTHNWP QPHTQPRLQN CLVRQFFSAV 120 HQSDQATANV IHSNSFSMAR EKKPSLALQQ GKSEAGVVLP NNLIMGLNQF SQKPTSTSLI 180 SMDGSSLNTR MIHYSSSELL ASRDCTSMFS SKRKCGVKSE EATPRCLVSA GGCHCSKRRK 240 LRIKRRIRVP ALSNKLADIP PDDYTWRKYG QKPIKGSPYP RSYYKCSSVR GCPARKHVER 300 CLEDPTMLVV TYEGDHQHPK ITFQAPTVAI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 242 | 248 | RIKRRIR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G30590.1 | 2e-51 | WRKY family protein |