PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g433600.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

CAMTA

Protein Properties

Length: 898aa MW: 101662 Da PI: 7.2731

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g433600.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	165.7	7.5e-52	26	142	3	118
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptf 94 +e k+rwl+++ei+aiL n++ +++ ++ + pksg+++L++rk++r+frkDG++wkkkkdgktv+E+he+LKvg+ e +++yYah+e+ ptf Pd.00g433600.m01 26 EEaKSRWLRPNEIHAILYNYKYFTIYVKPVNLPKSGTIVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGEDSPTF 118 4559*************************************************************************************** PP CG-1 95 qrrcywlLeeelekivlvhylevk 118 rrcywlL+++le+ivlvhy+e++ Pd.00g433600.m01 119 VRRCYWLLDKSLEHIVLVHYRETQ 142 *******************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 898 aa Download sequence
MEKQLEGSEI HGFHTMQDLD VGTIMEEAKS RWLRPNEIHA ILYNYKYFTI YVKPVNLPKS 60 GTIVLFDRKM LRNFRKDGHN WKKKKDGKTV KEAHEHLKVG NEERIHVYYA HGEDSPTFVR 120 RCYWLLDKSL EHIVLVHYRE TQEGSPVTPV NSNNSSSVSD PSAPWLLSEE LDSGANKAYC 180 AGENELSEPG DGLTVKNHEK RLHDINTLEW EELLITNDSK GDIVSCYDQQ NQVVGNGFIS 240 GGASVISAEM SAFDNLTNPT SRSDNVQFNL PDSPYVPTVE KTTYDSLDVL VNDGLHSQDS 300 FGRWINQVMA DPPGSVEDPA LESSSLAAQN SFASPSADHL QSSVPHQIFN ITDLSPAWAF 360 SNEKTKILIT GFFHQEYLHL AKSDLLCICG DVCLRAEIVQ AGVYRCFVPP HLPRVVNLFM 420 SIDGHKPISL VLNFEYRAPV LSDPIISSEE NKWEEFQAQM RLAYLLFSSS KSLNIVSNKV 480 LPNALKEAKK FSHRTSHISN SWAYLMKAVE DNKTPLPLAK DGLFELILKN RLKDWLLEKV 540 VASSTTKEYD AYGQGVIHLC AILEYTWAVR LFSWSGLSLD FRDRRGWTAL HWAAYCGREK 600 MVAVLLSAGA KPNLVTDPCS ENPGGYTAAD LAAMKGYDGL AAYLSEKALV EQFKDMSVAG 660 NASGSLQTSS NYAGNSENLS EDEIYLKDTL AAYRTAADAA ARIQAAFREN SLKLKAKAVQ 720 YSTPEAEARG IIAALKIQHA FRNYDTRKKI KAAARIQYRF RTWKMRQEFL SLRRQAIKIQ 780 AAFRGFQVRR QYRKVLWSVG VLEKAVLRWR FKRRGLRGLN VAPVEVDVDQ KQESDTEEDF 840 YRASRKQAEE RIERSVVRVQ AMFRSKKAQE EYSRMKLTHI EAKLEFEELL DPDSNMDS

Sequence ? help Back to Top

Protein Sequence Length: 898 aa Download sequence

MEKQLEGSEI HGFHTMQDLD VGTIMEEAKS RWLRPNEIHA ILYNYKYFTI YVKPVNLPKS  60
GTIVLFDRKM LRNFRKDGHN WKKKKDGKTV KEAHEHLKVG NEERIHVYYA HGEDSPTFVR  120
RCYWLLDKSL EHIVLVHYRE TQEGSPVTPV NSNNSSSVSD PSAPWLLSEE LDSGANKAYC  180
AGENELSEPG DGLTVKNHEK RLHDINTLEW EELLITNDSK GDIVSCYDQQ NQVVGNGFIS  240
GGASVISAEM SAFDNLTNPT SRSDNVQFNL PDSPYVPTVE KTTYDSLDVL VNDGLHSQDS  300
FGRWINQVMA DPPGSVEDPA LESSSLAAQN SFASPSADHL QSSVPHQIFN ITDLSPAWAF  360
SNEKTKILIT GFFHQEYLHL AKSDLLCICG DVCLRAEIVQ AGVYRCFVPP HLPRVVNLFM  420
SIDGHKPISL VLNFEYRAPV LSDPIISSEE NKWEEFQAQM RLAYLLFSSS KSLNIVSNKV  480
LPNALKEAKK FSHRTSHISN SWAYLMKAVE DNKTPLPLAK DGLFELILKN RLKDWLLEKV  540
VASSTTKEYD AYGQGVIHLC AILEYTWAVR LFSWSGLSLD FRDRRGWTAL HWAAYCGREK  600
MVAVLLSAGA KPNLVTDPCS ENPGGYTAAD LAAMKGYDGL AAYLSEKALV EQFKDMSVAG  660
NASGSLQTSS NYAGNSENLS EDEIYLKDTL AAYRTAADAA ARIQAAFREN SLKLKAKAVQ  720
YSTPEAEARG IIAALKIQHA FRNYDTRKKI KAAARIQYRF RTWKMRQEFL SLRRQAIKIQ  780
AAFRGFQVRR QYRKVLWSVG VLEKAVLRWR FKRRGLRGLN VAPVEVDVDQ KQESDTEEDF  840
YRASRKQAEE RIERSVVRVQ AMFRSKKAQE EYSRMKLTHI EAKLEFEELL DPDSNMDS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein