PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g432730.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 260aa MW: 28359.6 Da PI: 9.1024 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.8 | 3.7e-20 | 107 | 156 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 y+G+r+++ +g+W+AeIrdp + r++lg++ taeeAa+a++ a+++++g Pd.00g432730.m01 107 VYRGIRQRP-WGKWAAEIRDPQ----KgVRVWLGTYNTAEEAARAYDDAARRIRG 156 69*******.**********94....35*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
MCGGAIISDF ISAKRGRTLT AEDLWAEFDT ISDLLGLDHS SSSNNNNKKD QFEHQQNNKR 60 VAQKPKIPLS KGAGTSEKPK KTSPDAGAQK EEVGKASDKN KRVRKNVYRG IRQRPWGKWA 120 AEIRDPQKGV RVWLGTYNTA EEAARAYDDA ARRIRGGKAK LNFPELPPSS VPAPATPPLK 180 KRCVVGPAES TQSSLESSGN YCNYDPFEGG EIYGKKEVGS EHELKEQISS LELFLGLDEE 240 GPSEVNGRGG AVLKEQSCSG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G16770.1 | 1e-40 | ERF family protein |