PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g431710.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 1817aa MW: 202655 Da PI: 8.7172

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g431710.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.5	3.5e-09	698	733	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 WT+eE e +++a +++G++ Wk++a+ + +R+ +++ Pd.00g431710.m01 698 QWTKEELENFYEAYRKYGKD-WKKVASVVR-HRSVEMV 733 6***************99.******9.9998766 PP

Sequence ? help Back to Top
Protein Sequence Length: 1817 aa Download sequence
MRKRGGVSVR HIPRFFSIEA KDFRIKVDDL SYGGAVLITE KVKERSFHVS LELRCVYWLV 60 NELQMLVESK DQRFFRQYKG DSYQVWVEKL NNGKGPHMRL TKCIHGVVRS VVIPQGRNNI 120 GWVLMKENLE VILTGRINPN RATSSAQVDC TTLSGRGRVE GKTYKEAVES ENRPETKISK 180 NLMWGGKSNW SWVVVCERQV LHQPWSDIRR TLTSWLDKEV ELFPYQINRA FFVCDSKMEA 240 MRTSSFGKLG VMGQTDVRLY SWESGLKNNT PKIVSYGGWL GVSGLPMHWW RKDFFERIGN 300 ECGGLIELDQ RTENFKYLFE ARIRTRKNNV GFLPEIVIIN EGAESYFVKI RPISPAIKPS 360 NSWLPRSKEV GSRKSTEPCA GDGAVRLSNS GDGSPTHVEG DMNSLIGKRD IEGCEKEHSR 420 MMAKTLECGS GSGIWGTGRI SDLQIPQLVP ISERQSPENP VRNSARKAAN SSSIRAINSG 480 PNIGPILETT SEPKPANPSF YYHGPGVETT SEPKLANPPF YYHGPGDIGE PLTNLQGAGK 540 WAGPNKLKTR FLSKVSSLSG RRRKLPTGQS LSFTQNSQSG HGGEFATVAE ARKGAESCDS 600 VDGRSITSAA TEEDDLPSEV EESLDVIECD DGSVARMMTG QFEGFVETRG ETDNKNIGAA 660 NGVDKDREPS LERIGDAGIS TLQHTDGKRK LSDMLGPQWT KEELENFYEA YRKYGKDWKK 720 VASVVRHRSV EMVEALYSMN KAYLSLPEGV ASVVGLIAMM TDHYCILGGS DSEQENNEDA 780 ETSRKPQKHA RSKLRSESSK GLEGHIPDFS ESHPMASTSD CLSLLKNRRS GIRPHAVKKR 840 TPRVPVAYSN DQDNSRKYSS PARQGLKLNA DANNNDVAHE IALALTEASH RGGSPLVSWT 900 PKRKAKGTTP SPVRNGERMC AESEITNARL HGCEMDEGGC ELSLGSTEAD NDYYDRNEKY 960 AMGREGTGTL EVQQRRKRYF VKKKEVDESK NKHVEDIKEA CSGTEEGQKL VAIKGKLDTK 1020 VVKSARSFYK DTRKKSKKAL IGGDEGSPFD ALQTLADLSL MMPEAADTES SAHVKEDNFN 1080 IANKSKLKGS RPIPGVEHAA FKTSKLGKLG EGVHQSNSGL QKGKQKSLSF KIYNEAQTDC 1140 YASDNEKIEA TVEVKKSASK GKRSSHYTTH PKQGKLVKKT LWNASSTTDR KREENDSGLS 1200 SVQVPSANPA NLPTKNKGKW EDMQKSSIQK DTKSPESILD DQPDRLVPSF RNRELNIKEK 1260 LSSCLSRYQV RRWCAFEWFY SAIDYPWFAK REFVEYLDHV GLGHVPRLTR VEWGVIRSSL 1320 GRPRRFSEQF LKEEKEKLNQ YRESVRMHYA ELNAGTREGL PTDLARPLSV GQHVIAFHPR 1380 AREIHNGIVL TVDHSRCSVQ FDQPELGVEY IMDVDCMPLH PAENLPASFR KHNVTVNKYI 1440 ENLKELKINE QLKEGTTKGY MKISSSDKLV STGVPGYILP SNHRINKSSK QTGVKSSSFN 1500 VQAKVGHGET ASTQVANYQP SIPAQTQAKE ADVQAIYELT RALDKKEAVV SELRRMNDEV 1560 FENQRDEDNS IRDSEPFKKE YAAVLLQLSQ VNDQVSSALL CLRQRNTYRG SFPHTVVKPM 1620 DNLSDPGSHS NSYGYSCDVQ ESASHMREIV ESSRAKAHKM VDAAMQAFSS LRKENNFDKI 1680 EEVIDFVSNR LSDDAGMLAM GSSTTPADPI PFSQDQLTSC TSKPLATGCA HDPPKSNNLS 1740 NQSEEKLLSD LIVNCVAAFM MIQTCTARQF PPADVAQVLD HAVTSLQPFC PQNLSVYGEI 1800 QKCMGIIRNQ IMALVPT

Sequence ? help Back to Top

Protein Sequence Length: 1817 aa Download sequence

MRKRGGVSVR HIPRFFSIEA KDFRIKVDDL SYGGAVLITE KVKERSFHVS LELRCVYWLV  60
NELQMLVESK DQRFFRQYKG DSYQVWVEKL NNGKGPHMRL TKCIHGVVRS VVIPQGRNNI  120
GWVLMKENLE VILTGRINPN RATSSAQVDC TTLSGRGRVE GKTYKEAVES ENRPETKISK  180
NLMWGGKSNW SWVVVCERQV LHQPWSDIRR TLTSWLDKEV ELFPYQINRA FFVCDSKMEA  240
MRTSSFGKLG VMGQTDVRLY SWESGLKNNT PKIVSYGGWL GVSGLPMHWW RKDFFERIGN  300
ECGGLIELDQ RTENFKYLFE ARIRTRKNNV GFLPEIVIIN EGAESYFVKI RPISPAIKPS  360
NSWLPRSKEV GSRKSTEPCA GDGAVRLSNS GDGSPTHVEG DMNSLIGKRD IEGCEKEHSR  420
MMAKTLECGS GSGIWGTGRI SDLQIPQLVP ISERQSPENP VRNSARKAAN SSSIRAINSG  480
PNIGPILETT SEPKPANPSF YYHGPGVETT SEPKLANPPF YYHGPGDIGE PLTNLQGAGK  540
WAGPNKLKTR FLSKVSSLSG RRRKLPTGQS LSFTQNSQSG HGGEFATVAE ARKGAESCDS  600
VDGRSITSAA TEEDDLPSEV EESLDVIECD DGSVARMMTG QFEGFVETRG ETDNKNIGAA  660
NGVDKDREPS LERIGDAGIS TLQHTDGKRK LSDMLGPQWT KEELENFYEA YRKYGKDWKK  720
VASVVRHRSV EMVEALYSMN KAYLSLPEGV ASVVGLIAMM TDHYCILGGS DSEQENNEDA  780
ETSRKPQKHA RSKLRSESSK GLEGHIPDFS ESHPMASTSD CLSLLKNRRS GIRPHAVKKR  840
TPRVPVAYSN DQDNSRKYSS PARQGLKLNA DANNNDVAHE IALALTEASH RGGSPLVSWT  900
PKRKAKGTTP SPVRNGERMC AESEITNARL HGCEMDEGGC ELSLGSTEAD NDYYDRNEKY  960
AMGREGTGTL EVQQRRKRYF VKKKEVDESK NKHVEDIKEA CSGTEEGQKL VAIKGKLDTK  1020
VVKSARSFYK DTRKKSKKAL IGGDEGSPFD ALQTLADLSL MMPEAADTES SAHVKEDNFN  1080
IANKSKLKGS RPIPGVEHAA FKTSKLGKLG EGVHQSNSGL QKGKQKSLSF KIYNEAQTDC  1140
YASDNEKIEA TVEVKKSASK GKRSSHYTTH PKQGKLVKKT LWNASSTTDR KREENDSGLS  1200
SVQVPSANPA NLPTKNKGKW EDMQKSSIQK DTKSPESILD DQPDRLVPSF RNRELNIKEK  1260
LSSCLSRYQV RRWCAFEWFY SAIDYPWFAK REFVEYLDHV GLGHVPRLTR VEWGVIRSSL  1320
GRPRRFSEQF LKEEKEKLNQ YRESVRMHYA ELNAGTREGL PTDLARPLSV GQHVIAFHPR  1380
AREIHNGIVL TVDHSRCSVQ FDQPELGVEY IMDVDCMPLH PAENLPASFR KHNVTVNKYI  1440
ENLKELKINE QLKEGTTKGY MKISSSDKLV STGVPGYILP SNHRINKSSK QTGVKSSSFN  1500
VQAKVGHGET ASTQVANYQP SIPAQTQAKE ADVQAIYELT RALDKKEAVV SELRRMNDEV  1560
FENQRDEDNS IRDSEPFKKE YAAVLLQLSQ VNDQVSSALL CLRQRNTYRG SFPHTVVKPM  1620
DNLSDPGSHS NSYGYSCDVQ ESASHMREIV ESSRAKAHKM VDAAMQAFSS LRKENNFDKI  1680
EEVIDFVSNR LSDDAGMLAM GSSTTPADPI PFSQDQLTSC TSKPLATGCA HDPPKSNNLS  1740
NQSEEKLLSD LIVNCVAAFM MIQTCTARQF PPADVAQVLD HAVTSLQPFC PQNLSVYGEI  1800
QKCMGIIRNQ IMALVPT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein