PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g431170.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | SBP | ||||||||
Protein Properties | Length: 750aa MW: 84428 Da PI: 6.9416 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 114.8 | 4.7e-36 | 135 | 210 | 1 | 76 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 +Cqv++C+ad++e+k yhrrh+vC ++++a++v+++g+++r+CqqC++fh ls+fDe+krsCrr+L++hn+rrr+k Pd.00g431170.m01 135 RCQVPSCRADIKELKGYHRRHRVCLACANASTVFLDGETKRYCQQCGKFHVLSDFDEGKRSCRRKLERHNNRRRRK 210 6************************************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 750 aa Download sequence |
MEGPASPSST QSQQQRLDEA RFSEMEIQPP LPNQDTSTVW DWGDLLDFTV DDDLSISWGS 60 AEIDPALEDL PEDPNSNSGR VRKRDPRLAC TNFLAGHVPC ACPEIDERMM ELEEEEAGHG 120 KKRVKTARAP PGTARCQVPS CRADIKELKG YHRRHRVCLA CANASTVFLD GETKRYCQQC 180 GKFHVLSDFD EGKRSCRRKL ERHNNRRRRK PINSKGGIRK ESQREIQIED TNCDGGAGED 240 SIQLSSQLND KEELPESEGG RISTLSSVPD SQIVHSDGGA SLVASGETQM DGRKHDSNNS 300 LSPPNCDKSA YSSMCPTGRI SFKLYDWNPA EFPRRLRHQI FQWLASMPVE LEGYIRPGCI 360 ILTVFIAMPK FMWMKLLEDP VSYIHDFVVV PGRMLSGRGN ILVYLNDMIF RVVKDGTSVI 420 KGKVEMRAPR LHYVHPRYFE AGKPMEFVAC GSDLLQPKFR FLVSFSGKYL AYNYYPESSP 480 SQIEGDTATN LDHQLYKIRV PQTEANRFGP AFIEIENESG LSNFLPILIA DKEIMTASQI 540 QRFNYLLNFL ISIKSTTILE KVSQNLKTLM DNMELHSAND GTSDADMRLL KNYMDYARDR 600 QKIDNSGVLV PRSGRLVQKE DIVSQSQSCF QNVGNLVVPL QCQDTEITVD GRVDVMVGST 660 SHERSETVPL LSKKAVMKAN LIKKWPRVAN FCTSGEVSRS RSSGAFLRFR PVLYVICAAA 720 ICLGFCAVLF HPHEVGEFAV TIRRCLFDDF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 197 | 209 | RRKLERHNNRRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G18830.1 | 0.0 | SBP family protein |