PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g427950.m02 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 1125aa MW: 125747 Da PI: 8.6593 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 28.1 | 4.6e-09 | 30 | 65 | 3 | 40 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 WT+eE e +++a +++G++ Wk++a+ + +R+ +++ Pd.00g427950.m02 30 QWTKEELENFYEAYRKYGKD-WKKVASVVC-HRSVEMV 65 6*****************99.******999.9998765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1125 aa Download sequence |
MNEAASNKYG ENANKTGQKK RKLSDMLGPQ WTKEELENFY EAYRKYGKDW KKVASVVCHR 60 SVEMVEALYS MNKAYLSLPE GVASVVGLIA MMTGHYCILG GSDSEQENNE DAETSRKPQK 120 HARSKLRSES SKGLEGHIPD FSESHPMAST SDCLSLLKNR RSGIRPHAVK KRTPRVPVAY 180 SNDQDNSRKY SSPARQGLKL NADANNNDVA HEIALALTEA SHRGGSPLVS WTPKRKAKGT 240 TPSPVRNGER MCAESEMTNA RLHGCEMDEG GCELSLGSTE ADNDYYDRNE KYAMGREGTG 300 TLEVQQRRKR YFVKKKEVDE SKNKHVEDIK EACSGTEEGQ KLVAIKGKLD TKVVKSARSF 360 YKDTRKKSKK ALIGGDEGSP FDALQTLADL SLMMPEAADT ESSAHVKEDN FNIANKSKLK 420 GSRPIPGVEH AAFKTSKLGK LGEGVHQSNS GLQKGKQNSL SFKIYNEAQT DCYATDNEKI 480 EATVEVKKSA SKGKRSSHYT MHPKQGKLVK KTLWNASSTT DRKREENDSG LSTVQVRSAN 540 PANLPTKNKG KWEDMQKSSI QKDTKSPESI LDDQPDRLVP SFRNRELNIK EKLSSCLSRY 600 QVRRWCAFEW FYSAIDYPWF AKREFVEYLD HVGLGHVPRL TRVEWGVIRS SLGRPRRFSE 660 QFLKEEKEKL NQYRESVRTH YAELNAGTRE GLPTDLARPL SVGQHVIAFH PRAREIHNGI 720 VLTVDHSRCS VQFDQPELGV EYIMDVDCMP LHPAENLPAS FRKHNVTVNK YIENLKELKI 780 NEQLKEGTTK GYMKISSSDK LVKSSSFNVQ AKVGPGETAS TQVANYQPSI PAQTQAKEAD 840 VQAIYELTRA LDKKEAVVSE LRRMNDEVFE NQRDEDNSIR DSEPFKKEYA AVLLQLSQVN 900 DQVSSALLCL RQRNTYRGSS PHTVVKPMDN LSGPVSHSNS YGYSCDVQES ASHMREIVES 960 SRAKAHKMVD AAMQAFSSLR KENNFDKIEE VIDFVSNRLS DDVGMLAMGS STTPADPIPF 1020 SQDQLTSCTS KPLATGCAHD PPKSNNLSNQ SEEKLLSDLI VNCVAAFMMI QTCTARQFPP 1080 ADVAQVLDHA VTSLQPFCPQ NLSVYGEIQK CMGIIRNQIM ALVPT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21430.2 | 0.0 | MYB_related family protein |